Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR/GalS regulog to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--

Reference regulog properties
Source regulog: GalR/GalS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Galactose utilization
Effector: Galactose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Orthologous TF(s) SARI_00701, SARI_04646
Regulated genes 4
Built upon 78 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Locus tag Position Score Sequence
Position: -121
Score: 5.4
Sequence: GGCTGTAACCGTTTCCATCC
Locus tag: SARI_00701
SARI_00701 -121 5.4 GGCTGTAACCGTTTCCATCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galS
Ortholog function: galactose operon repressor galS
Escherichia coli str. K-12 substr. MG1655 b2151 -113 5.5 GGCTGTAACCGTTTCCATTG
Salmonella typhimurium LT2 STM2191 -121 5.4 GGCTGTAACCGTTTCCATCC
Citrobacter koseri ATCC BAA-895 CKO_00640 -124 4.9 GCATGTAACCGTTTCCAGCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02589 -127 5.2 GGATGTAAACGTTTCCAGCC
Enterobacter sp. 638 Ent638_2751 -127 5.5 GGATGTAACCGTTTTCATCT
Erwinia amylovora ATCC 49946 EAM_2208 -128 4.9 GGCTGTAACCGTTTTCATGG
Serratia proteamaculans 568 Spro_1562 -102 5.4 GTATGTAAACGTTTTCTTTC
Position: -282
Score: 5.5
Sequence: GCATGTAACCGTTTTCAATC
Locus tag: SARI_00702
SARI_00702 -282 5.5 GCATGTAACCGTTTTCAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mglB
Ortholog function: beta-methylgalactoside ABC transporter, periplasmic binding protein
Escherichia coli str. K-12 substr. MG1655 b2150 -287 5.3 CGATGTAACCGCTTTCAATC
Citrobacter koseri ATCC BAA-895 CKO_00641 -287 5.5 GGATGTAACCGCTTTCAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02588 -256 5.4 GGATGTAACCGCTTTCAATT
Enterobacter sp. 638 Ent638_2750 -288 5.8 TGATGTAACCGTTTTCAATC
Yersinia pestis KIM y2662 -229 5.8 TTGTGTAACCGGTTTCAATC
Serratia proteamaculans 568 Spro_1563 -246 6.1 TTGTGTAACCGTTTTCAATC
Position: -102
Score: 6.1
Sequence: CAGTGTAAACGATTACACCA
Locus tag: SARI_04554
SARI_04554 -102 6.1 CAGTGTAAACGATTACACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: galactose transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -282 5 AACTGAAACCGATTACACCA
-100 6.2 TAGTGTAAGCGATTACACTG
Salmonella typhimurium LT2 STM3091 -283 4.7 TCATGAAAGCGGTTACATTC
-101 6.1 CAGTGTAAACGATTACACCA
Citrobacter koseri ATCC BAA-895 CKO_04318 -282 5.2 TAATGAAACCGTTTACCCTC
-101 6.6 TAGTGTAAACGATTACACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -285 4.7 AAATGAAAGCGATTACATAG
-102 5.6 TTGTGGAAACGATTACACAG
Enterobacter sp. 638 Ent638_3347 -284 5 AAATGAAAGCGATTACACCA
-102 6.3 TAGTGTAACCGATTACACCA
Erwinia amylovora ATCC 49946 EAM_2827 -170 5.6 TGTTGTAACCGGTTACATTC
Serratia proteamaculans 568 Spro_1160 -274 4.3 GTGTGATATCGGTTACATTT
-100 6.1 TTGTGTAATCGTTTCCACTA
Edwardsiella tarda EIB202 ETAE_2966 -273 5.6 AAGTGAAAACGATTACATTT
-79 6 GTATGTAAACGATTACATTT
Position: -33
Score: 5.3
Sequence: TAATGTAAGCGTTTACCCAC
Locus tag: SARI_04646
SARI_04646 -33 5.3 TAATGTAAGCGTTTACCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: galactose operon repressor galR
Escherichia coli str. K-12 substr. MG1655 b2837 -32 5.2 GAATGTAAGCGTTTACCCAC
Salmonella typhimurium LT2 STM3011 -33 5.3 TAATGTAAGCGTTTACCCAC
Citrobacter koseri ATCC BAA-895 CKO_04211 -33 5.1 AAATGTAAGCGTTTACCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03246 -33 5.5 GTATGTAAACGCTTACCCTA
Enterobacter sp. 638 Ent638_3278 -35 5.3 GTGTGTAAACGCTTACCCCC
Erwinia amylovora ATCC 49946 EAM_2770 -35 4.9 AAATGTAAACGCTTACCCAG
Yersinia pestis KIM y3183 32 5.4 TGATGTAAGCGGTTACCCTA
Serratia proteamaculans 568 Spro_3832 -34 5.2 GAATGTAAGCGATTACCCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3172 -240 5.3 AAGTGTAATCGGTTACCCTA
Edwardsiella tarda EIB202 ETAE_2890 -41 5.2 TGGTGTAAACGTTTACGGTT
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