Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UxuR regulog to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Orthologous TF(s) SARI_03069
Regulated genes 4
Built upon 44 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Locus tag Position Score Sequence
Position: -106
Score: 5.2
Sequence: CTTTTGGTTAACCAGTTT
Locus tag: SARI_03069
SARI_03069 -106 5.2 CTTTTGGTTAACCAGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
Position: -150
Score: 5
Sequence: GATTTGGTTATCCAATTC
Locus tag: SARI_04491
SARI_04491 -150 5 GATTTGGTTATCCAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -180 5.4 GATGTGGTTAACCAATTT
Salmonella typhimurium LT2 STM3135 -336 5.6 AAATTGGTTGACCAATCA
-149 5.2 GATTTGGTTAGCCAATTT
Yersinia pestis KIM y2902 -510 4.5 AAgTTGtTagACCAgTTT
-352 4 AAATTGGTaAgtCcAaTa
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1093 -109 5.2 TAATTGGTCAATCAATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0170 -77 5.7 TTTTTGGTTGACCAATTT