Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Klebsiella pneumoniae NTUH-K2044

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Klebsiella pneumoniae NTUH-K2044
Orthologous TF(s) KP1_1659
Regulated genes 51
Built upon 656 sites [see more]
Predicted regulatory interactions in Klebsiella pneumoniae NTUH-K2044
Locus tag Position Score Sequence
Position: -63
Score: 4.9
Sequence: TGTAATGATAACCATTCTC
Locus tag: pK2044_00140
pK2044_00140 -63 4.9 TGTAATGATAACCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecI
Ortholog function: ECF-family RNA polymerase sigma factor fecI
Escherichia coli str. K-12 substr. MG1655 b4293 -63 4.7 TGTAATGATAACCATTCTC
-57 4.1 GATAACCATTCTCATATTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1079 -76 4.6 TGTAATGAGAACCATTATC
-70 4.1 GAGAACCATTATCATATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4444 -64 4.5 TGTAATGATAACTATTCTC
Position: -85
Score: 4.8
Sequence: AAAAATAATTCTCATTTCC
Locus tag: pK2044_00155
pK2044_00155 -85 4.8 AAAAATAATTCTCATTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecA
Ortholog function: Iron(III) dicitrate outer membrane transporter precursor protein FecA
Escherichia coli str. K-12 substr. MG1655 b4291 -63 4.7 TGTAATGATAACCATTCTC
-57 4.1 GATAACCATTCTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_03833 -95 4.2 GATAACGAAAAAAATTATC
-89 4.5 GAAAAAAATTATCATTTTT
-83 4.1 AATTATCATTTTTATTGTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1077 -216 4.2 GATAACGAAAAAAATTATC
-210 4.4 GAAAAAAATTATCATTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4446 -88 4.5 GTAAAAAATTATCATTTTC
Position: -4
Score: 4.6
Sequence: GATAATGGGAATCTTTATC
Locus tag: pK2044_01340
pK2044_01340 -4 4.6 GATAATGGGAATCTTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM y3380 -63 4.8 GATAATGATAACCACTATT
Yersinia pestis KIM y3381 -63 4.8 GATAATGATAACCACTATT
Serratia proteamaculans 568 Spro_0922 -63 4.2 GATAACAATAAATATTATT
-45 4.1 TGATATAAGAATCATTCTC
Position: -94
Score: 4.4
Sequence: GGCATTGATAAGCATTTTC
Locus tag: KP1_0076
KP1_0076 -94 4.4 GGCATTGATAAGCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -44
Score: 4.7
Sequence: AATATCAGTAATCATTATC
Position: -38
Score: 4.7
Sequence: AGTAATCATTATCATTTAG
Locus tag: KP1_0781
KP1_0781 -44 4.7 AATATCAGTAATCATTATC
-38 4.7 AGTAATCATTATCATTTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuF
Ortholog function: ferric iron reductase involved in ferric hydroximate transport
Escherichia coli str. K-12 substr. MG1655 b4367 -122 5.1 GATAATGATAACCAATATC
-99 4.5 GATAATTTTTATCATTTGC
-34 4 AGCAATCATTATCATTTAG
Salmonella typhimurium LT2 STM4550 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03429 -234 4.8 GATAATGATAACCAATAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04821 -44 4.5 AATATCAGTAATCATTATC
-38 4.4 AGTAATCATTATCATTTAG
Enterobacter sp. 638 Ent638_0527 -237 5.1 GATAATGATAACCAATATC
Yersinia pestis KIM y2642 -67 4.9 GCTATTGATAATCACTATC
-61 4.4 GATAATCACTATCATTCTG
Photorhabdus luminescens subsp. laumondii TTO1 plu4627 -100 4.3 GACAATGATAATAATAATA
-94 5.3 GATAATAATAATAATTATC
-88 4.9 AATAATAATTATCATAATT
-82 4.1 AATTATCATAATTATATTT
Position: -50
Score: 4.7
Sequence: AATAATAATTCTCGTTTAC
Locus tag: KP1_1002
KP1_1002 -50 4.7 AATAATAATTCTCGTTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Escherichia coli str. K-12 substr. MG1655 b0150 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0191 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03218 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00165 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0690 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Position: -159
Score: 4.7
Sequence: GATAATGAGTATAGTTCTC
Position: -153
Score: 4.3
Sequence: GAGTATAGTTCTCATTCTC
Locus tag: KP1_1465
KP1_1465 -159 4.7 GATAATGAGTATAGTTCTC
-153 4.3 GAGTATAGTTCTCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02606
Ortholog function: putative periplasmic protein
Citrobacter koseri ATCC BAA-895 CKO_02606 -143 4.2 GAGAATAAGTATAGTTCTC
-137 4 AAGTATAGTTCTCATTCTC
Enterobacter sp. 638 Ent638_1057 -215 4.6 GATAATGAGTATAGTTCTC
-209 4.1 GAGTATAGTTCTCATTCTC
Position: -226
Score: 4
Sequence: TTAATTAATTGTCATTATT
Position: -197
Score: 4.4
Sequence: ATTATTGATAACTATTTGC
Position: -191
Score: 4.2
Sequence: GATAACTATTTGCATTTGC
Locus tag: KP1_1547
KP1_1547 -226 4 TTAATTAATTGTCATTATT
-197 4.4 ATTATTGATAACTATTTGC
-191 4.2 GATAACTATTTGCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepA
Ortholog function: TonB-dependent siderophore receptor FepA
Escherichia coli str. K-12 substr. MG1655 b0584 -184 4.1 ATTATTGATAACTATTTGC
-178 4 GATAACTATTTGCATTTGC
Salmonella typhimurium LT2 STM0585 -132 4.1 ATTATTGATAACTATTTGC
-126 4 GATAACTATTTGCATTTGC
Citrobacter koseri ATCC BAA-895 CKO_02579 -246 4.4 GATAACTATTTTCATTTGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00602 -197 4.1 ATTATTGATAACTATTTGC
-191 4 GATAACTATTTGCATTTGC
Enterobacter sp. 638 Ent638_1116 -196 4.4 ATTATTGATAACTATTTTC
-190 4.4 GATAACTATTTTCATTTGC
Position: -43
Score: 5
Sequence: GATAACGATAATTACTATC
Position: -37
Score: 5.2
Sequence: GATAATTACTATCATTATC
Locus tag: KP1_1553
KP1_1553 -43 5 GATAACGATAATTACTATC
-37 5.2 GATAATTACTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepD
Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein
Escherichia coli str. K-12 substr. MG1655 b0590 -37 4.8 GATAACGATAATTAATTTC
-31 4.9 GATAATTAATTTCATTATC
Salmonella typhimurium LT2 STM0592 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Citrobacter koseri ATCC BAA-895 CKO_02571 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00608 -43 4.8 GATAACGATAATTACTATC
-37 5 GATAATTACTATCATTATC
Enterobacter sp. 638 Ent638_1122 -30 4.8 GATAACGATAATTACTATC
-24 5 GATAATTACTATCATTATC
Serratia proteamaculans 568 Spro_3424 -48 4.4 AATAATGATAATAAAACTC
-42 4.4 GATAATAAAACTCATTTAT
Position: -94
Score: 5
Sequence: GATAATGATAGTAATTATC
Position: -88
Score: 4.9
Sequence: GATAGTAATTATCGTTATC
Locus tag: KP1_1555
KP1_1555 -94 5 GATAATGATAGTAATTATC
-88 4.9 GATAGTAATTATCGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655 b0591 -98 4.8 GATAATGAAATTAATTATC
-92 4.9 GAAATTAATTATCGTTATC
Salmonella typhimurium LT2 STM0593 -98 4.9 GATAATGATAGTAATTATC
-92 4.8 GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895 CKO_02570 -99 4.9 GATAATGATAGTAATTATC
-93 4.8 GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00609 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Enterobacter sp. 638 Ent638_1123 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Serratia proteamaculans 568 Spro_3423 -112 4.4 ATAAATGAGTTTTATTATC
-106 4.4 GAGTTTTATTATCATTATT
Position: -166
Score: 4.9
Sequence: GATATTAAGAATAATTATC
Position: -160
Score: 4.9
Sequence: AAGAATAATTATCATTTAT
Locus tag: KP1_1556
KP1_1556 -166 4.9 GATATTAAGAATAATTATC
-160 4.9 AAGAATAATTATCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB
Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component
Escherichia coli str. K-12 substr. MG1655 b0592 -230 4.7 GAAAATGAGAAGCATTATT
Citrobacter koseri ATCC BAA-895 CKO_02569 -203 4.7 GAAAATGAGAAGCATTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00610 -166 4.8 GATATTAAGAATAATTATC
-160 4.6 AAGAATAATTATCATTTAT
Enterobacter sp. 638 Ent638_1124 -159 4.6 AAGAATAATTATCATTTAT
-44 4.7 GAAAATGAGAAGCATTAAC
Position: -35
Score: 4.8
Sequence: ATAAATGATAATTATTCTT
Position: -29
Score: 4.9
Sequence: GATAATTATTCTTAATATC
Locus tag: KP1_1557
KP1_1557 -35 4.8 ATAAATGATAATTATTCTT
-29 4.9 GATAATTATTCTTAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: entC
Ortholog function: isochorismate synthetase, siderophore biosynthesis
Citrobacter koseri ATCC BAA-895 CKO_02568 -162 4.5 GTTAATGCTTCTCATTTTC
-47 5 ATAAATGATAATCATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00611 -47 4.5 ATAAATGATAATTATTCTT
-41 4.8 GATAATTATTCTTAATATC
Position: -96
Score: 4.7
Sequence: TATAATGAGAATAGTTATC
Locus tag: KP1_1712
KP1_1712 -96 4.7 TATAATGAGAATAGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655 b0755 -47 5 TATAATGAGAATTATTATC
-41 4.7 GAGAATTATTATCATTAAA
Salmonella typhimurium LT2 STM0772 -47 5 TATAATGAGAATTATTATC
-41 4.5 GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895 CKO_02381 -46 5 TATAATGAGAATTATTATC
-40 4.5 GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00768 -96 4.6 TATAATGAGAATAGTTATC
Enterobacter sp. 638 Ent638_1246 -164 4.7 TATAATGAGAATTGTTATC
-158 4.1 GAGAATTGTTATCATTCAA
Yersinia pestis KIM y3048 -103 5.3 TATAATGATAATAATTATC
-97 4.6 GATAATAATTATCATTGAA
Serratia proteamaculans 568 Spro_1288 -51 4.9 TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202 ETAE_2569 -49 4.6 CATGATGATAATAATTATC
-43 5.3 GATAATAATTATCATTATA
Position: -104
Score: 4.6
Sequence: GTTTATGATAATTGTTTTC
Position: -98
Score: 5
Sequence: GATAATTGTTTTCATTATC
Locus tag: KP1_1980
KP1_1980 -104 4.6 GTTTATGATAATTGTTTTC
-98 5 GATAATTGTTTTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y1526 -108 4.8 AACAATGATAATCATTTTT
-102 4.7 GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3137 -169 4.2 CGAAATAATAATAACTATC
-163 4.7 AATAATAACTATCATTATT
-157 4.4 AACTATCATTATTATTATC
Position: -76
Score: 5.1
Sequence: TGTAATGATAATCACTATC
Position: -70
Score: 4.4
Sequence: GATAATCACTATCATAAAT
Locus tag: KP1_2035
KP1_2035 -76 5.1 TGTAATGATAATCACTATC
-70 4.4 GATAATCACTATCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -4
Score: 4.9
Sequence: TGTAATGATAATTGTTATC
Position: 2
Score: 4.9
Sequence: GATAATTGTTATCATTAAT
Locus tag: KP1_2278
KP1_2278 -4 4.9 TGTAATGATAATTGTTATC
2 4.9 GATAATTGTTATCATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iroN
Ortholog function: TonB-dependent siderophore receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01244 -67 4.8 TGTAATGATAATTGTTATC
-61 4.7 GATAATTGTTATCATTAAT
Position: -127
Score: 4.5
Sequence: GCAAATGATAACTATTCTT
Position: -121
Score: 4.2
Sequence: GATAACTATTCTTTTTATC
Locus tag: KP1_2284
KP1_2284 -127 4.5 GCAAATGATAACTATTCTT
-121 4.2 GATAACTATTCTTTTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fiu
Ortholog function: iron outer membrane transporter
Escherichia coli str. K-12 substr. MG1655 b0805 -123 4.4 GCTTATCAAAATTATTATC
-117 4.5 CAAAATTATTATCACTTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01250 -126 4.2 GCAAATGATAACTATTCTT
-120 4.1 GATAACTATTCTTTTTATC
Position: -87
Score: 4.7
Sequence: ATAAATGAGAACCATTATC
Locus tag: KP1_2725
KP1_2725 -87 4.7 ATAAATGAGAACCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iroE
Ortholog function: putative hydrolase of the alpha/beta superfamily
Salmonella typhimurium LT2 STM2776 -70 4.9 GATATTGGTAATTATTATC
-64 5.1 GGTAATTATTATCATTCTC
-58 4.5 TATTATCATTCTCATTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01678 -93 4.6 AGAAATGAGAACCATTATC
-87 4.1 GAGAACCATTATCATAAAA
Position: -103
Score: 4.8
Sequence: AATAATGATTACTATTCGC
Locus tag: KP1_2971
KP1_2971 -103 4.8 AATAATGATTACTATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncE
Ortholog function: putative receptor, ATP binding
Escherichia coli str. K-12 substr. MG1655 b1452 -103 4.6 AATAATGATTACCATTCCC
Salmonella typhimurium LT2 STM1586 -103 5.2 AATAATGATTATTATTCTC
Citrobacter koseri ATCC BAA-895 CKO_01494 -202 4.5 AATAATGATTACTATTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01908 -103 4.5 AATAATGATTACTATTCGC
Enterobacter sp. 638 Ent638_2098 -100 4.8 AATAATGATTACTATTCTC
Serratia proteamaculans 568 Spro_0586 -143 4.8 AATAATGATTACTATTCTC
Position: -174
Score: 4.6
Sequence: GCGAATAGTAATCATTATT
Locus tag: KP1_2972
KP1_2972 -174 4.6 GCGAATAGTAATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncD
Ortholog function: TonB-dependent siderophore outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01909 -173 4.5 GCGAATAGTAATCATTATT
-167 4.1 AGTAATCATTATTTATATC
Position: -129
Score: 4.3
Sequence: TTGAATGATTCTCAATTAC
Locus tag: KP1_3196
KP1_3196 -129 4.3 TTGAATGATTCTCAATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02848
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_02848 -175 4.1 TTGAATGATTCTCAATTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02105 -210 4.1 TTGAATGATTCTCAATTAC
Enterobacter sp. 638 Ent638_3442 -118 4.1 TTGAATGATTCTCAATTAC
Yersinia pestis KIM y3343 -41 4.2 ACAAACGATTTTGATTATC
-35 4.6 GATTTTGATTATCATTCGC
Serratia proteamaculans 568 Spro_1016 -52 4.3 GCTAATGAGAGTGATTATC
Position: -66
Score: 4.8
Sequence: TGAAGTGATAATCATTATC
Position: -60
Score: 5.2
Sequence: GATAATCATTATCACTAAC
Locus tag: KP1_3237
KP1_3237 -66 4.8 TGAAGTGATAATCATTATC
-60 5.2 GATAATCATTATCACTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -71
Score: 4.8
Sequence: AATAATGAGTTTCATTTGC
Locus tag: KP1_3247
KP1_3247 -71 4.8 AATAATGAGTTTCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: eitA
Ortholog function: citrate-dependent iron(III) ABC transporter, peiplasmic component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02149 -101 4.6 AATAATGAGTTTCATTTGC
Enterobacter sp. 638 Ent638_3205 -73 4.8 TAAAATGAGTTTCATTATC
-67 4.2 GAGTTTCATTATCATTAAA
Position: -49
Score: 5
Sequence: ATTATTGATAATGATTATC
Position: -43
Score: 5.2
Sequence: GATAATGATTATCATTGTT
Locus tag: KP1_3266
KP1_3266 -49 5 ATTATTGATAATGATTATC
-43 5.2 GATAATGATTATCATTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -216
Score: 4.6
Sequence: GCAAATGAGAATTATTTTT
Locus tag: KP1_3308
KP1_3308 -216 4.6 GCAAATGAGAATTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA
Ortholog function: oligopeptide ABC transporter; periplasmic binding protein
Escherichia coli str. K-12 substr. MG1655 b1243 -245 4.7 GGTAATGAGAATAATTAAC
Citrobacter koseri ATCC BAA-895 CKO_01320 -247 4.3 GGTGATGAGAATTATTTTC
-241 4 GAGAATTATTTTCAATAAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02197 -216 4.4 GCAAATGAGAATTATTTTT
Enterobacter sp. 638 Ent638_2302 -247 4 GTAGATGAGAATGATTTTC
Position: -86
Score: 4.1
Sequence: ACAAACAATAATAATTCGC
Position: -80
Score: 4.4
Sequence: AATAATAATTCGCATTACT
Locus tag: KP1_3427
KP1_3427 -86 4.1 ACAAACAATAATAATTCGC
-80 4.4 AATAATAATTCGCATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -38
Score: 3.4
Sequence: GCCAATAACATCTATTATT
Locus tag: KP1_3535
KP1_3535 -38 3.4 GCCAATAACATCTATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -42
Score: 4.8
Sequence: ATTTATAATAATGATTATC
Position: -36
Score: 4.6
Sequence: AATAATGATTATCAATCAG
Locus tag: KP1_3544
KP1_3544 -42 4.8 ATTTATAATAATGATTATC
-36 4.6 AATAATGATTATCAATCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdiA
Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family)
Escherichia coli str. K-12 substr. MG1655 b1916 -38 4.4 ATAAATGATACTCACTCTC
Salmonella typhimurium LT2 STM1950 -44 4.4 ATTCATAATAATGATTATC
-38 5.3 AATAATGATTATCAATATC
Citrobacter koseri ATCC BAA-895 CKO_01029 -44 4.4 AAACATTATAATGATTATC
-38 5 TATAATGATTATCAATCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02414 -78 4.6 ATTTATAATAATGATTATC
-72 4.4 AATAATGATTATCAATCAG
Enterobacter sp. 638 Ent638_2503 -39 4.2 AATAATGATTAGTTTTTTC
Position: -95
Score: 5
Sequence: GATAATGGTTATTATTCAC
Locus tag: KP1_3586
KP1_3586 -95 5 GATAATGGTTATTATTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtP
Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components
Citrobacter koseri ATCC BAA-895 CKO_01250 -191 4.4 GTTATTGATAATGGTTATT
-185 4.7 GATAATGGTTATTATTCAC
Citrobacter koseri ATCC BAA-895 CKO_00913 -191 4.4 GTTATTGATAATGGTTATT
-185 4.7 GATAATGGTTATTATTCAC
Yersinia pestis KIM y2397 -101 4.4 GTTATTGATAATGGTTATT
-95 4.7 GATAATGGTTATTATTCAC
Position: -90
Score: 5
Sequence: GTGAATAATAACCATTATC
Position: -84
Score: 4.8
Sequence: AATAACCATTATCAATAAC
Locus tag: KP1_3587
KP1_3587 -90 5 GTGAATAATAACCATTATC
-84 4.8 AATAACCATTATCAATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtA
Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes
Citrobacter koseri ATCC BAA-895 CKO_00912 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Citrobacter koseri ATCC BAA-895 CKO_01249 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Yersinia pestis KIM y2398 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Position: -63
Score: 5.2
Sequence: GTTAATAATTATTATTCTC
Locus tag: KP1_3588
KP1_3588 -63 5.2 GTTAATAATTATTATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: irp2
Ortholog function: non-ribosomal peptide synthase (siderophore synthase)
Citrobacter koseri ATCC BAA-895 CKO_00911 -63 4.9 GTTAATAATTATTATTCTC
Yersinia pestis KIM y2399 -63 5.1 GTTAATAATTATTATTATC
Position: -74
Score: 4.8
Sequence: AGAAATAGTTATCATTTTC
Locus tag: KP1_3593
KP1_3593 -74 4.8 AGAAATAGTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_00905 -74 4.6 AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895 CKO_01243 -74 4.6 AGAAATAGTTATCATTTTC
Yersinia pestis KIM y2404 -74 4.6 AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320 PMI2596 -64 4.2 GCAAATGATATTAATTCGC
-58 4.4 GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu2316 -160 5.1 ATTAATGAGAATCATTATC
-154 4.6 GAGAATCATTATCAATAGT
Position: -213
Score: 4.4
Sequence: TGTATTGATAATCGTAATC
Position: -207
Score: 5.4
Sequence: GATAATCGTAATCATTATC
Position: -201
Score: 4.6
Sequence: CGTAATCATTATCTTTATC
Position: -195
Score: 4.3
Sequence: CATTATCTTTATCATTTTC
Locus tag: KP1_3820
KP1_3820 -213 4.4 TGTATTGATAATCGTAATC
-207 5.4 GATAATCGTAATCATTATC
-201 4.6 CGTAATCATTATCTTTATC
-195 4.3 CATTATCTTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cirA
Ortholog function: TonB-dependent ferric iron-catecholate receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02593 -249 4.1 CATTATCTTTATCATTTTC
Enterobacter sp. 638 Ent638_2756 -200 4.3 TTAATTGATAATAGTTATC
-194 4.5 GATAATAGTTATCGTTTGC
Position: -68
Score: 4.5
Sequence: GAACTTGATAATCATTCGC
Position: -62
Score: 4.5
Sequence: GATAATCATTCGCATTTTG
Locus tag: KP1_3996
KP1_3996 -68 4.5 GAACTTGATAATCATTCGC
-62 4.5 GATAATCATTCGCATTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -99
Score: 4.7
Sequence: GCAAATAAGAATTATTTTC
Position: -93
Score: 4.5
Sequence: AAGAATTATTTTCATTTAT
Locus tag: KP1_4347
KP1_4347 -99 4.7 GCAAATAAGAATTATTTTC
-93 4.5 AAGAATTATTTTCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -124
Score: 4.3
Sequence: GATAATACCTATCATTACC
Locus tag: KP1_4356
KP1_4356 -124 4.3 GATAATACCTATCATTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuR
Ortholog function: TonB-dependent outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03087 -133 4 GATAATACCTATCATTACC
Erwinia amylovora ATCC 49946 EAM_1726 -140 4.2 TTTGTTGATAATGATTATC
-134 5.1 GATAATGATTATCATTTGT
Position: -62
Score: 4.7
Sequence: GGCAATCATTATCATTTGC
Locus tag: KP1_4796
KP1_4796 -62 4.7 GGCAATCATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjH
Ortholog function: FAD-binding 9, siderophore-interacting domain protein
Escherichia coli str. K-12 substr. MG1655 b3070 -71 4.2 ATGATTAACAATCATTATC
-65 4.6 AACAATCATTATCATTTGC
Salmonella typhimurium LT2 STM3214 -62 4.3 AACAATCATTATCATTTAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03499 -62 4.5 GGCAATCATTATCATTTGC
Enterobacter sp. 638 Ent638_3524 -61 4.1 AGCAATCATTATCATTTAA
Position: -55
Score: 4.8
Sequence: TGTAATCATAACCATTCTC
Position: -49
Score: 4
Sequence: CATAACCATTCTCATTTAA
Locus tag: KP1_5048
KP1_5048 -55 4.8 TGTAATCATAACCATTCTC
-49 4 CATAACCATTCTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Escherichia coli str. K-12 substr. MG1655 b3337 -51 3.9 tgaAATaAgAActATTtTC
-45 3.9 aAgAActATttTCATTtat
Salmonella typhimurium LT2 STM3444 -55 4.6 TGTAATCATAACCATTCTC
-49 4.3 CATAACCATTCTCATTTAC
Citrobacter koseri ATCC BAA-895 CKO_04744 -55 4.3 TGTAATCATAACTATTCTC
-49 4.2 CATAACTATTCTCATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03723 -55 4.6 TGTAATCATAACCATTCTC
-49 3.9 cATAAccATtcTCATTtaa
Enterobacter sp. 638 Ent638_3755 -55 4.7 TGTAATCATAATTATTCTC
-49 4.2 CATAATTATTCTCACTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4034 -132 3.9 tgaAATaAaAATaATTcTt
-126 4.4 AAAAATAATTCTTATTTAC
Proteus mirabilis HI4320 PMI3252 -57 4.2 TGAAATAACAATGATTATC
-51 4.8 AACAATGATTATCATTTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4729 -59 4.4 TGAAATGAGACTCATTATT
-53 3.6 GAgAcTcATtATtATTtaa
Position: -133
Score: 4.3
Sequence: GATGATAAAAACCATTCTC
Position: -127
Score: 4.8
Sequence: AAAAACCATTCTCATTATC
Locus tag: KP1_5110
KP1_5110 -133 4.3 GATGATAAAAACCATTCTC
-127 4.8 AAAAACCATTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC
Position: -120
Score: 5.2
Sequence: GACAATAATAATCATTCTC
Position: -114
Score: 4.9
Sequence: AATAATCATTCTCATTCGC
Locus tag: KP1_5140
KP1_5140 -120 5.2 GACAATAATAATCATTCTC
-114 4.9 AATAATCATTCTCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03806 -120 4.9 GACAATAATAATCATTCTC
-114 4.7 AATAATCATTCTCATTCGC
© 2009-2020 RegPrecise