Propagation of GalR/GalS regulog to Klebsiella pneumoniae NTUH-K2044
| Source regulog: | GalR/GalS - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Galactose utilization |
| Effector: | Galactose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Klebsiella pneumoniae NTUH-K2044 |
| Orthologous TF(s) | KP1_4519, KP1_3816 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -241
Score: 5.8 Sequence: TTATGTAACCGTTTTCATTG
Locus tag: KP1_0495
|
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| KP1_0495 | -241 | 5.8 | TTATGTAACCGTTTTCATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytfQ | ||||
| Ortholog function: periplasmic binding protein/LacI transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4227 | -147 | 4.6 | AGATGAAAGCGATTACAAAC |
| 0 | 4.5 | ATGTGGAAACGCTTACTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03603 | -148 | 4.7 | GAATGAAAGCGATTACAAAG |
| 0 | 4.6 | ATGTGGAAGCGCTTACTTTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04622 | -283 | 5.8 | TTATGTAACCGTTTTCATTG |
| -42 | 4.2 | ATGTGGAAGCGCTTACTTCT | ||
| Enterobacter sp. 638 | Ent638_0412 | -148 | 4.9 | GAATGAAAGCGATTACAAAC |
| -94 | 4.3 | TGATGTAACGCATTCCGTTA | ||
| 0 | 4.1 | ATGTGGAAGCGCTTACTACT | ||
|
Position: -66
Score: 5.1 Sequence: TTTTGTAATCGATTACTTTT
Position: -35
Score: 5.1 Sequence: TTTTGTAATCGATTACTTTT
Locus tag: KP1_1469
|
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| KP1_1469 | -66 | 5.1 | TTTTGTAATCGATTACTTTT | |
| -35 | 5.1 | TTTTGTAATCGATTACTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ECA1400 | ||||
| Ortholog function: putative nucleoside H+ symporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02603 | -70 | 5.1 | TTTTGTAATCGATTACTTTT |
| -38 | 4.9 | ATTTGTAATCGATTACTTTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00538 | -66 | 5.1 | TTTTGTAATCGATTACTTTT |
| -35 | 5.1 | TTTTGTAATCGATTACTTTT | ||
| Enterobacter sp. 638 | Ent638_1060 | -68 | 5.1 | TTTTGTAATCGATTACTTTT |
| -37 | 5.1 | TTTTGTAATCGATTACTTTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1400 | -64 | 5 | AAAAGTAATCGATTACATTT |
| -34 | 5.1 | GATTGTAATCGATTACTTTT | ||
|
Position: -84
Score: 6.4 Sequence: AAGTGTAAACGATTCCACTA
Locus tag: KP1_1717
|
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| KP1_1717 | -84 | 6.4 | AAGTGTAAACGATTCCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galE | ||||
| Ortholog function: UDP-galactose-4-epimerase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0759 | -96 | 6.6 | TTGTGTAAACGATTCCACTA |
| Salmonella typhimurium LT2 | STM0776 | -96 | 6.4 | GTGTGTAAACGATTCCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_02376 | -54 | 6.4 | AAGTGTAAACGATTCCACTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00773 | -252 | 4.9 | CAGTGGAGACGGTTACACTT |
| -96 | 6.4 | AAGTGTAAACGATTCCACTA | ||
| Enterobacter sp. 638 | Ent638_1250 | -96 | 6.2 | CGGTGTAACCGATTCCACTA |
| Yersinia pestis KIM | y3043 | -95 | 6.4 | GAGTGTAAACGATTCCATTA |
| Edwardsiella tarda EIB202 | ETAE_2564 | -195 | 5.5 | TAGTGTAAGCGATACCACAA |
| -95 | 6.4 | TAGTGTAAACGATTCCATTT | ||
|
Position: -286
Score: 5.4 Sequence: GGATGTAACCGCTTTCAATT
Locus tag: KP1_3815
|
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| KP1_3815 | -286 | 5.4 | GGATGTAACCGCTTTCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mglB | ||||
| Ortholog function: beta-methylgalactoside ABC transporter, periplasmic binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2150 | -287 | 5.3 | CGATGTAACCGCTTTCAATC |
| Citrobacter koseri ATCC BAA-895 | CKO_00641 | -287 | 5.5 | GGATGTAACCGCTTTCAATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02588 | -256 | 5.4 | GGATGTAACCGCTTTCAATT |
| Enterobacter sp. 638 | Ent638_2750 | -288 | 5.8 | TGATGTAACCGTTTTCAATC |
| Yersinia pestis KIM | y2662 | -229 | 5.8 | TTGTGTAACCGGTTTCAATC |
| Serratia proteamaculans 568 | Spro_1563 | -246 | 6.1 | TTGTGTAACCGTTTTCAATC |
|
Position: -127
Score: 5.2 Sequence: GGATGTAAACGTTTCCAGCC
Locus tag: KP1_3816
|
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| KP1_3816 | -127 | 5.2 | GGATGTAAACGTTTCCAGCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galS | ||||
| Ortholog function: galactose operon repressor galS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2151 | -113 | 5.5 | GGCTGTAACCGTTTCCATTG |
| Salmonella typhimurium LT2 | STM2191 | -121 | 5.4 | GGCTGTAACCGTTTCCATCC |
| Citrobacter koseri ATCC BAA-895 | CKO_00640 | -124 | 4.9 | GCATGTAACCGTTTCCAGCC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02589 | -127 | 5.2 | GGATGTAAACGTTTCCAGCC |
| Enterobacter sp. 638 | Ent638_2751 | -127 | 5.5 | GGATGTAACCGTTTTCATCT |
| Erwinia amylovora ATCC 49946 | EAM_2208 | -128 | 4.9 | GGCTGTAACCGTTTTCATGG |
| Serratia proteamaculans 568 | Spro_1562 | -102 | 5.4 | GTATGTAAACGTTTTCTTTC |
|
Position: -33
Score: 5.5 Sequence: GTATGTAAACGCTTACCCTA
Locus tag: KP1_4519
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| KP1_4519 | -33 | 5.5 | GTATGTAAACGCTTACCCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galR | ||||
| Ortholog function: galactose operon repressor galR | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2837 | -32 | 5.2 | GAATGTAAGCGTTTACCCAC |
| Salmonella typhimurium LT2 | STM3011 | -33 | 5.3 | TAATGTAAGCGTTTACCCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04211 | -33 | 5.1 | AAATGTAAGCGTTTACCCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03246 | -33 | 5.5 | GTATGTAAACGCTTACCCTA |
| Enterobacter sp. 638 | Ent638_3278 | -35 | 5.3 | GTGTGTAAACGCTTACCCCC |
| Erwinia amylovora ATCC 49946 | EAM_2770 | -35 | 4.9 | AAATGTAAACGCTTACCCAG |
| Yersinia pestis KIM | y3183 | 32 | 5.4 | TGATGTAAGCGGTTACCCTA |
| Serratia proteamaculans 568 | Spro_3832 | -34 | 5.2 | GAATGTAAGCGATTACCCAG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3172 | -240 | 5.3 | AAGTGTAATCGGTTACCCTA |
| Edwardsiella tarda EIB202 | ETAE_2890 | -41 | 5.2 | TGGTGTAAACGTTTACGGTT |
|
Position: -102
Score: 5.6 Sequence: TTGTGGAAACGATTACACAG
Locus tag: KP1_4651
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| KP1_4651 | -102 | 5.6 | TTGTGGAAACGATTACACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galP | ||||
| Ortholog function: galactose transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2943 | -282 | 5 | AACTGAAACCGATTACACCA |
| -100 | 6.2 | TAGTGTAAGCGATTACACTG | ||
| Salmonella typhimurium LT2 | STM3091 | -283 | 4.7 | TCATGAAAGCGGTTACATTC |
| -101 | 6.1 | CAGTGTAAACGATTACACCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04318 | -282 | 5.2 | TAATGAAACCGTTTACCCTC |
| -101 | 6.6 | TAGTGTAAACGATTACACTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03376 | -285 | 4.7 | AAATGAAAGCGATTACATAG |
| -102 | 5.6 | TTGTGGAAACGATTACACAG | ||
| Enterobacter sp. 638 | Ent638_3347 | -284 | 5 | AAATGAAAGCGATTACACCA |
| -102 | 6.3 | TAGTGTAACCGATTACACCA | ||
| Erwinia amylovora ATCC 49946 | EAM_2827 | -170 | 5.6 | TGTTGTAACCGGTTACATTC |
| Serratia proteamaculans 568 | Spro_1160 | -274 | 4.3 | GTGTGATATCGGTTACATTT |
| -100 | 6.1 | TTGTGTAATCGTTTCCACTA | ||
| Edwardsiella tarda EIB202 | ETAE_2966 | -273 | 5.6 | AAGTGAAAACGATTACATTT |
| -79 | 6 | GTATGTAAACGATTACATTT | ||