Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RutR regulog to Klebsiella pneumoniae NTUH-K2044

Reference regulog properties
Source regulog: RutR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Klebsiella pneumoniae NTUH-K2044
Orthologous TF(s) KP1_2028
Regulated genes 3
Built upon 13 sites [see more]
Predicted regulatory interactions in Klebsiella pneumoniae NTUH-K2044
Locus tag Position Score Sequence
Position: -267
Score: 6.4
Sequence: TTTTGACCATCTGGTCCACT
Locus tag: KP1_0853
KP1_0853 -267 6.4 TTTTGACCATCTGGTCCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: carA
Ortholog function: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Escherichia coli str. K-12 substr. MG1655 b0032 -294 6.5 TTTTGACCATTTGGTCCACT
Salmonella typhimurium LT2 STM0066 -294 6.5 ATTTGACCATTTGGTCCACT
Citrobacter koseri ATCC BAA-895 CKO_03351 -268 6.4 TTTTGACCAAATGGTCCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00040 -267 6.4 TTTTGACCATCTGGTCCACT
Enterobacter sp. 638 Ent638_0591 -294 5.8 TTTTGACCATTTGGTCTGGT
Erwinia amylovora ATCC 49946 EAM_0660 -297 6.2 TTCTGACCATTTGGTCCACT
Position: -181
Score: 6
Sequence: TTTTGACCATCCAGTCCACT
Locus tag: KP1_2027
KP1_2027 -181 6 TTTTGACCATCCAGTCCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutA
Ortholog function: Pyrimidine oxygenase
Escherichia coli str. K-12 substr. MG1655 b1012 -126 6.2 TTTTGACCGTTTAGTCCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01038 -181 6 TTTTGACCATCCAGTCCACT
Enterobacter sp. 638 Ent638_1525 -185 6.1 TTTTGACCATTCAGTCCACT
Serratia proteamaculans 568 Spro_1823 -187 5.8 TTTTGACCAAATGGTCTGTT
Position: -123
Score: 4.2
Sequence: AGTGGACTGGATGGTCAAAA
Locus tag: KP1_2028
KP1_2028 -123 4.2 AGTGGACTGGATGGTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutR
Ortholog function: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01039 -123 4.2 AGTGGACTGGATGGTCAAAA
Serratia proteamaculans 568 Spro_1824 -118 5 AACAGACCATTTGGTCAAAA
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