Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480
Orthologous TF(s) Senteenterica_010100016896
Regulated genes 10
Built upon 130 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480
Locus tag Position Score Sequence
Position: -84
Score: 3.3
Sequence: GGCTGATCGGACTTGTT
Locus tag: Senteenterica_010100014540
Senteenterica_010100014540 -84 3.3 GGCTGATCGGACTTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabB
Ortholog function: 3-oxoacyl-(acyl carrier protein) synthase
Escherichia coli str. K-12 substr. MG1655 b2323 -83 3.3 GGCTGATCGGACTTGTT
Salmonella typhimurium LT2 STM2378 -84 3.3 GGCTGATCGGACTTGTT
Citrobacter koseri ATCC BAA-895 CKO_00462 -83 3.3 GGCTGATCGGACTTGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02713 -83 3.8 GTCTGATCGGACTTGTT
Enterobacter sp. 638 Ent638_2871 -82 3.3 GGCTGATCGGACTTGTT
Erwinia amylovora ATCC 49946 EAM_2336 -82 3.9 AGCTGATCGGACTTGTT
Yersinia pestis KIM y1591 -85 3.7 CGCTGATCGGACTTGTT
Serratia proteamaculans 568 Spro_3368 -84 3.7 CGCTGATCGGACTTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3063 -86 3.3 GGCTGATCGGACTTGTT
Edwardsiella tarda EIB202 ETAE_2421 -126 3.7 ATCTGGTTTTACCAGCG
Proteus mirabilis HI4320 PMI1795 -89 3.3 TCCTGATCGGACTTGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu3184 -96 3.3 TCCTGATCGGACTTGTT
Position: -42
Score: 4.8
Sequence: ATCAGGTCAGACCACTA
Locus tag: Senteenterica_010100014605
Senteenterica_010100014605 -42 4.8 ATCAGGTCAGACCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadI
Ortholog function: FadI component of anaerobic fatty acid oxidation complex
Escherichia coli str. K-12 substr. MG1655 b2342 -43 5.1 ATCAGGTCAGACCACTT
Salmonella typhimurium LT2 STM2389 -42 4.8 ATCAGGTCAGACCACTA
Citrobacter koseri ATCC BAA-895 CKO_00448 -43 5.1 ATCAGGTCAGACCACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02724 -44 5.1 ATCAGGTCAGACCACTT
Enterobacter sp. 638 Ent638_2882 -48 5.1 ATCAGGTCAGACCACTT
Yersinia pestis KIM y1579 -66 5 ATCAGGTCAGACCTGTT
Serratia proteamaculans 568 Spro_3379 -56 5 ATCAGGTCAGACCTCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3079 -53 5 ATCAGGTCTGACCTGTT
Proteus mirabilis HI4320 PMI1808 -50 5 ATCAGGTCAGACCTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu3201 -81 4.7 ATCAGGTCAGACCTGTC
Position: -119
Score: 4.2
Sequence: AGCTGGTCAGACCTATA
Position: -95
Score: 4.4
Sequence: CACTGGTCTGATTTCTA
Locus tag: SeSB_A2813
SeSB_A2813 -119 4.2 AGCTGGTCAGACCTATA
-95 4.4 CACTGGTCTGATTTCTA
Supported by regulated orthologs from reference regulons