Propagation of GalR/GalS regulog to Yersinia bercovieri ATCC 43970
| Source regulog: | GalR/GalS - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Galactose utilization |
| Effector: | Galactose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia bercovieri ATCC 43970 |
| Orthologous TF(s) | YberA_01001136, YberA_01000856 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -38
Score: 5.7 Sequence: TGATGTAAGCGATTACCCTA
Locus tag: YberA_01000856
|
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| YberA_01000856 | -38 | 5.7 | TGATGTAAGCGATTACCCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galR | ||||
| Ortholog function: galactose operon repressor galR | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2837 | -32 | 5.2 | GAATGTAAGCGTTTACCCAC |
| Salmonella typhimurium LT2 | STM3011 | -33 | 5.3 | TAATGTAAGCGTTTACCCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04211 | -33 | 5.1 | AAATGTAAGCGTTTACCCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03246 | -33 | 5.5 | GTATGTAAACGCTTACCCTA |
| Enterobacter sp. 638 | Ent638_3278 | -35 | 5.3 | GTGTGTAAACGCTTACCCCC |
| Erwinia amylovora ATCC 49946 | EAM_2770 | -35 | 4.9 | AAATGTAAACGCTTACCCAG |
| Yersinia pestis KIM | y3183 | 32 | 5.4 | TGATGTAAGCGGTTACCCTA |
| Serratia proteamaculans 568 | Spro_3832 | -34 | 5.2 | GAATGTAAGCGATTACCCAG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3172 | -240 | 5.3 | AAGTGTAATCGGTTACCCTA |
| Edwardsiella tarda EIB202 | ETAE_2890 | -41 | 5.2 | TGGTGTAAACGTTTACGGTT |
|
Position: -126
Score: 5.4 Sequence: GTATGTAAACGTTTTCTTTC
Locus tag: YberA_01001136
|
||||
| YberA_01001136 | -126 | 5.4 | GTATGTAAACGTTTTCTTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galS | ||||
| Ortholog function: galactose operon repressor galS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2151 | -113 | 5.5 | GGCTGTAACCGTTTCCATTG |
| Salmonella typhimurium LT2 | STM2191 | -121 | 5.4 | GGCTGTAACCGTTTCCATCC |
| Citrobacter koseri ATCC BAA-895 | CKO_00640 | -124 | 4.9 | GCATGTAACCGTTTCCAGCC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02589 | -127 | 5.2 | GGATGTAAACGTTTCCAGCC |
| Enterobacter sp. 638 | Ent638_2751 | -127 | 5.5 | GGATGTAACCGTTTTCATCT |
| Erwinia amylovora ATCC 49946 | EAM_2208 | -128 | 4.9 | GGCTGTAACCGTTTTCATGG |
| Serratia proteamaculans 568 | Spro_1562 | -102 | 5.4 | GTATGTAAACGTTTTCTTTC |
|
Position: -336
Score: 6.1 Sequence: TTGTGTAACCGTTTTCAATC
Locus tag: YberA_01001137
|
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| YberA_01001137 | -336 | 6.1 | TTGTGTAACCGTTTTCAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mglB | ||||
| Ortholog function: beta-methylgalactoside ABC transporter, periplasmic binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2150 | -287 | 5.3 | CGATGTAACCGCTTTCAATC |
| Citrobacter koseri ATCC BAA-895 | CKO_00641 | -287 | 5.5 | GGATGTAACCGCTTTCAATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02588 | -256 | 5.4 | GGATGTAACCGCTTTCAATT |
| Enterobacter sp. 638 | Ent638_2750 | -288 | 5.8 | TGATGTAACCGTTTTCAATC |
| Yersinia pestis KIM | y2662 | -229 | 5.8 | TTGTGTAACCGGTTTCAATC |
| Serratia proteamaculans 568 | Spro_1563 | -246 | 6.1 | TTGTGTAACCGTTTTCAATC |
|
Position: -94
Score: 6.4 Sequence: GAGTGTAAACGATTCCATTA
Locus tag: YberA_01002907
|
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| YberA_01002907 | -94 | 6.4 | GAGTGTAAACGATTCCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galE | ||||
| Ortholog function: UDP-galactose-4-epimerase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0759 | -96 | 6.6 | TTGTGTAAACGATTCCACTA |
| Salmonella typhimurium LT2 | STM0776 | -96 | 6.4 | GTGTGTAAACGATTCCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_02376 | -54 | 6.4 | AAGTGTAAACGATTCCACTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00773 | -252 | 4.9 | CAGTGGAGACGGTTACACTT |
| -96 | 6.4 | AAGTGTAAACGATTCCACTA | ||
| Enterobacter sp. 638 | Ent638_1250 | -96 | 6.2 | CGGTGTAACCGATTCCACTA |
| Yersinia pestis KIM | y3043 | -95 | 6.4 | GAGTGTAAACGATTCCATTA |
| Edwardsiella tarda EIB202 | ETAE_2564 | -195 | 5.5 | TAGTGTAAGCGATACCACAA |
| -95 | 6.4 | TAGTGTAAACGATTCCATTT | ||