Propagation of FabR regulog to Yersinia bercovieri ATCC 43970
| Source regulog: | FabR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia bercovieri ATCC 43970 |
| Orthologous TF(s) | YberA_01002381 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -83
Score: 5.4 Sequence: AGTGAACACATGTAAGCT
Locus tag: YberA_01001558
|
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| YberA_01001558 | -83 | 5.4 | AGTGAACACATGTAAGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lcfH | ||||
| Ortholog function: putative long-chain-fatty-acid--CoA ligase | ||||
| Yersinia pestis KIM | y3641 | -84 | 5.8 | AGTGAACACCTGTACGCT |
| Serratia proteamaculans 568 | Spro_0747 | -82 | 5.5 | AGTAAACACGTGTAAGCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3830 | -60 | 5.6 | AATGTACAGCTGTACGCT |
| Edwardsiella tarda EIB202 | ETAE_0624 | -82 | 5.5 | AGTGCACAGCTGTACGCT |
| Proteus mirabilis HI4320 | PMI2081 | -92 | 6.1 | AGCGAACAGGTGTAAGCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3671 | -114 | 5.9 | AGCTAACACCTGTAAGCT |
|
Position: -56
Score: 6.3 Sequence: AGCGTACAGCTGTACGCT
Locus tag: YberA_01003011
|
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| YberA_01003011 | -56 | 6.3 | AGCGTACAGCTGTACGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabA | ||||
| Ortholog function: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0954 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Salmonella typhimurium LT2 | STM1067 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02114 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00983 | -57 | 6 | AGCTTACACGTGTTAGCT |
| Enterobacter sp. 638 | Ent638_1466 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Erwinia amylovora ATCC 49946 | EAM_1374 | -57 | 5.8 | TGCTTACAACTGTAAGCT |
| Yersinia pestis KIM | y2740 | -56 | 6.3 | AGCGTACAGCTGTACGCT |
| Serratia proteamaculans 568 | Spro_1751 | -56 | 6.5 | AGCGTACACGTGTAAGCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1748 | -56 | 6.4 | AGCGTACAGGTGTACGCT |
| Edwardsiella tarda EIB202 | ETAE_1264 | -56 | 6.2 | AGCGTACACCTGTTAGCT |
| Proteus mirabilis HI4320 | PMI0782 | -56 | 6.5 | AGCGTACAAGTGTAAGCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1772 | -57 | 6.1 | AGCGTACAAGTGTACTCT |
|
Position: -170
Score: 5.9 Sequence: AGCGTACACGTGTACACT
Locus tag: YberA_01003322
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| YberA_01003322 | -170 | 5.9 | AGCGTACACGTGTACACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hyIII | ||||
| Ortholog function: COG1272: Predicted membrane protein, hemolysin III homolog | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2899 | -81 | 5.1 | AGCTAACAGGTGTTCACT |
| Salmonella typhimurium LT2 | STM3049 | -82 | 4.9 | AGCTAACATGTGTTCACT |
| Citrobacter koseri ATCC BAA-895 | CKO_04262 | -80 | 5.1 | AGCTAACAGGTGTTCACT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03327 | -80 | 5.1 | AGCTAACAGGTGTTCACT |
| Enterobacter sp. 638 | Ent638_3317 | -86 | 5.1 | AGCTAACAGGTGTTCACT |
| Erwinia amylovora ATCC 49946 | EAM_2786 | -108 | 5.9 | AGCTTACAAGTGTACTCT |
| Yersinia pestis KIM | y3285 | -121 | 5.9 | AGCGTACAGGTGTACACT |
| Serratia proteamaculans 568 | Spro_3900 | -89 | 5.9 | AGCGTACACGTGTACACT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0757 | -157 | 5.7 | AGCTTACACGTGTACACT |
| Edwardsiella tarda EIB202 | ETAE_2937 | -139 | 5.9 | AGCGTACACGTGTACACT |