Propagation of NtrC regulog to Yersinia mollaretii ATCC 43969
Source regulog: | NtrC - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | Fis |
Regulation mode: | activator (repressor) |
Biological process: | Nitrogen assimilation |
Effector: | Phosphorylated NtrB, signal histidine kinase |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Yersinia mollaretii ATCC 43969 |
Orthologous TF(s) | YmolA_01003246 |
Regulated genes | 6 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -190
Score: 5.3 Sequence: CGCACTAATTTAGTGCA
Locus tag: YmolA_01001364
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YmolA_01001364 | -190 | 5.3 | CGCACTAATTTAGTGCA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glnK | ||||
Ortholog function: nitrogen regulatory protein P-II | ||||
Escherichia coli str. K-12 substr. MG1655 | b0450 | -137 | 5.2 | TGCACTGTCATAGTGCG |
Salmonella typhimurium LT2 | STM0462 | -177 | 5.2 | TGCACCGTCGTGGTGCG |
Citrobacter koseri ATCC BAA-895 | CKO_02708 | -147 | 5.3 | TGCACCGTTATAGTGCG |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00413 | -181 | 5.3 | TGCACCGTTGTGGTGCA |
Enterobacter sp. 638 | Ent638_0918 | -160 | 5.3 | TGCACTGTCATGGTGCG |
Erwinia amylovora ATCC 49946 | EAM_1004 | -209 | 4.7 | TGCATCATTTTAGTGCG |
-189 | 5.1 | TGAACTATTTTGGTGCA | ||
Yersinia pestis KIM | y1041 | -191 | 5.8 | TGCACCAACTTGGTGCG |
Serratia proteamaculans 568 | Spro_1109 | -192 | 5.3 | CGCACCAAAGTAGTGCG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1160 | -244 | 5.8 | TGCACCAACTTAGTGCA |
Edwardsiella tarda EIB202 | ETAE_1003 | -152 | 5.2 | TGCACCGTTTTGGTGCT |
Proteus mirabilis HI4320 | PMI0126 | -114 | 4.7 | TGCACTAAGTTAGTGAG |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3857 | -173 | 5.5 | TGCACTAATTCGGTGCA |
Position: -290
Score: 4.7 Sequence: CGCACCACAGAAGTGCA
Position: -261
Score: 4.2 Sequence: TGCCTCTATTTGGTGCG
Locus tag: YmolA_01001600
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YmolA_01001600 | -290 | 4.7 | CGCACCACAGAAGTGCA | |
-261 | 4.2 | TGCCTCTATTTGGTGCG | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: gltI | ||||
Ortholog function: Glutamate-aspartate ABC transporter, substrate-binding component | ||||
Yersinia pestis KIM | y1189 | -278 | 4.2 | TGCCTCTATTTGGTGCG |
Serratia proteamaculans 568 | Spro_1214 | -212 | 4.8 | GGCACCATAAGGGTGCA |
-183 | 5 | TGCATTAATTTGGTGCG | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1314 | -300 | 5.3 | CGCACCAAATTGGTGCC |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1307 | -239 | 4.2 | TGCACCAAAAAAATGAT |
Position: -287
Score: 4.7 Sequence: CGCACTGAAATGGAGCG
Locus tag: YmolA_01002913
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YmolA_01002913 | -287 | 4.7 | CGCACTGAAATGGAGCG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: hisJ | ||||
Ortholog function: Histidine ABC transporter, substrate-binding component | ||||
Escherichia coli str. K-12 substr. MG1655 | b2309 | -162 | 5.5 | TGCACTATCGTGGTGCA |
Salmonella typhimurium LT2 | STM2354 | -211 | 4.4 | GGAACTATCACGGTGCA |
-182 | 5.1 | TGCACCTTTTTGGTGCA | ||
Citrobacter koseri ATCC BAA-895 | CKO_00478 | -212 | 4.3 | TTAACCATCACGGTGCG |
-183 | 5.8 | TGCACCATCATGGTGCG | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02699 | -215 | 5.3 | TGCCCCAAAAGGGTGCA |
-185 | 4 | TGGATCATTTCAGTGCA | ||
Enterobacter sp. 638 | Ent638_2858 | -212 | 4.1 | TTCCCTGTCACGGTGCG |
-182 | 5.2 | TGACCCAATATGGTGCA | ||
Yersinia pestis KIM | y1607 | -123 | 4.8 | AGCACTGAAATGGGGCA |
Serratia proteamaculans 568 | Spro_3326 | -265 | 4.4 | CGCACTGAATTAGGGCG |
-243 | 4.3 | TGCACCATAATGATCCC | ||
Position: -309
Score: 5.7 Sequence: TGCACCAACATAGTGCT
Position: -277
Score: 5.3 Sequence: AGCACCAGAATAGTGCA
Locus tag: YmolA_01003244
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YmolA_01003244 | -309 | 5.7 | TGCACCAACATAGTGCT | |
-277 | 5.3 | AGCACCAGAATAGTGCA | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glnA | ||||
Ortholog function: Glutamine synthetase type I (EC 6.3.1.2) | ||||
Escherichia coli str. K-12 substr. MG1655 | b3870 | -221 | 5.9 | TGCACCAACATGGTGCT |
-189 | 5.4 | AGCACTATATTGGTGCA | ||
Salmonella typhimurium LT2 | STM4007 | -224 | 5.5 | TGCACCAATGTGGTGCT |
-192 | 5.2 | AGCACTATTTTGGTGCA | ||
Citrobacter koseri ATCC BAA-895 | CKO_03140 | -202 | 5.9 | TGCACCAACATGGTGCT |
-170 | 5.4 | AGCACTATATTGGTGCA | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04178 | -251 | 6 | TGCACCAAAATGGTGCT |
-219 | 5.2 | AGCACTATTTTGGTGCA | ||
Enterobacter sp. 638 | Ent638_4096 | -237 | 5.3 | CGCACCATTATGGTGCT |
-205 | 5.6 | AGCACTATAATGGTGCA | ||
Erwinia amylovora ATCC 49946 | EAM_0032 | -288 | 5.1 | TGCACCAAAATGGTGAC |
-256 | 5.3 | AGCACCAGAATGGTGCG | ||
Yersinia pestis KIM | y3804 | -384 | 5.6 | TGCACCAAAATAGTGCC |
-353 | 5.5 | GGCACCAAAATAGTGCA | ||
Serratia proteamaculans 568 | Spro_4881 | -220 | 5.2 | TGCACCATTACAGTGCT |
-188 | 5.2 | TGCACCATTTAAGTGCA | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0029 | -218 | 5.3 | TGCACCAAACAAGTGCA |
-186 | 5.4 | AGCACCAACTTGGTGCT | ||
Edwardsiella tarda EIB202 | ETAE_3493 | -220 | 5.5 | TGCACCAAGATTGTGCG |
-188 | 5.2 | TGCACCATTATGGAGCA | ||
Proteus mirabilis HI4320 | PMI2882 | -223 | 5.9 | TGCACCAAAATTGTGCA |
-189 | 5.8 | TGCACCAAATTTGTGCA | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu0237 | -303 | 5.1 | CGCACTAATATTGTGCG |
-272 | 5.9 | TGCACCAATATAGTGCA | ||