Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LeuO regulog to Yersinia frederiksenii ATCC 33641

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Yersinia frederiksenii ATCC 33641
Orthologous TF(s) YfreA_01000211
Regulated genes 1
Built upon 21 sites [see more]
Predicted regulatory interactions in Yersinia frederiksenii ATCC 33641
Locus tag Position Score Sequence
Position: -319
Score: 3.7
Sequence: AGTCTTATTATTGAT
Position: -310
Score: 3.8
Sequence: ATTGATGCTTATGAT
Position: -288
Score: 4.2
Sequence: CTTGGTATTGATAAT
Position: -282
Score: 3.8
Sequence: ATTGATAATGTAAAT
Position: -269
Score: 4.5
Sequence: ATTGGTTATATTTAT
Position: -235
Score: 4.6
Sequence: ATTTTTCTTGTTTAT
Position: -108
Score: 4.8
Sequence: ATTGGCATCATTAAT
Position: -99
Score: 3.6
Sequence: ATTAATAATAAGTAT
Locus tag: YfreA_01000211
YfreA_01000211 -319 3.7 AGTCTTATTATTGAT
-310 3.8 ATTGATGCTTATGAT
-288 4.2 CTTGGTATTGATAAT
-282 3.8 ATTGATAATGTAAAT
-269 4.5 ATTGGTTATATTTAT
-235 4.6 ATTTTTCTTGTTTAT
-108 4.8 ATTGGCATCATTAAT
-99 3.6 ATTAATAATAAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuO
Ortholog function: Dual transcriptional regulator LeuO, LysR family
Citrobacter koseri ATCC BAA-895 CKO_03302 -241 3.5 ATTCGCCACGCTTAT
Edwardsiella tarda EIB202 ETAE_0623 -246 4.7 ATTGCCCTTAATTAT
Enterobacter sp. 638 Ent638_0623 -229 4.6 ATTCATTGGATTTAT
Escherichia coli str. K-12 substr. MG1655 b0076 -325 4.1 ATTAATGTTAAGAAT
-243 4.9 ATTCGCGGTAGTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00081 -291 4.2 ATTTTTATGGATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3672 -223 4.2 ATTGGAATTATATAT
-112 4.7 ATTGATCTCGTTAAT
Proteus mirabilis HI4320 PMI2082 -289 3.8 ATTTTGTTTTATTAT
Salmonella typhimurium LT2 STM0115 -263 3.9 ATTCACTTGGTGTAT
-240 4.4 ATTCGCCATAGTTAT
Serratia proteamaculans 568 Spro_0746 -400 3.6 ATTCTTGATATCAAT
Yersinia pestis KIM y3642 -413 4.2 ATTATTGGTGATTAT
-210 5 ATTGGCGTTATTAAT
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