Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SiaR regulog to Yersinia frederiksenii ATCC 33641

Reference regulog properties
Source regulog: SiaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia frederiksenii ATCC 33641
Orthologous TF(s) YfreA_01001472
Regulated genes 2
Built upon 14 sites [see more]
Predicted regulatory interactions in Yersinia frederiksenii ATCC 33641
Locus tag Position Score Sequence
Position: -185
Score: 5.5
Sequence: AATGGAGTTTTACTCCTTT
Locus tag: YfreA_01001471
YfreA_01001471 -185 5.5 AATGGAGTTTTACTCCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanT
Ortholog function: Sialic acid transporter (permease) NanT
Yersinia pestis KIM y1465 -188 5.5 AATGGAGTTTTACTCCTTT
Position: -198
Score: 5.4
Sequence: AATGAAGCTTAACTCCAAT
Locus tag: YfreA_01001474
YfreA_01001474 -198 5.4 AATGAAGCTTAACTCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanK
Ortholog function: N-acetylmannosamine kinase (EC 2.7.1.60)
Yersinia pestis KIM y1461 -111 5.4 AAAGGAGTTTAACTCCAAA