Propagation of ExuR regulog to Yersinia frederiksenii ATCC 33641
| Source regulog: | ExuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia frederiksenii ATCC 33641 |
| Orthologous TF(s) | YfreA_01004053 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -67
Score: 5.3 Sequence: AAACTGGTCTAACAACTTT
Locus tag: YfreA_01001257
|
||||
| YfreA_01001257 | -67 | 5.3 | AAACTGGTCTAACAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuB | ||||
| Ortholog function: D-mannonate oxidoreductase (EC 1.1.1.57) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00608 | -191 | 4.4 | AAGTTGTTATACCAAATTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02605 | -193 | 3.7 | AAAGTtGTtatACcAaTaa |
| Enterobacter sp. 638 | Ent638_2768 | -193 | 3.8 | AAAGTtGTtatACcAaTaT |
| Yersinia pestis KIM | y2903 | -91 | 5.3 | AAACTGGTCTAACAACTTT |
| Serratia proteamaculans 568 | Spro_3239 | -64 | 5.3 | AAACTGGTCTGATAACTTC |
| Edwardsiella tarda EIB202 | ETAE_2291 | -89 | 4.7 | CAAGTGGTCTAACACCTTT |
|
Position: -45
Score: 6.1 Sequence: AAATTGGTGTGATAACTTC
Locus tag: YfreA_01004051
|
||||
| YfreA_01004051 | -45 | 6.1 | AAATTGGTGTGATAACTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Yersinia pestis KIM | y3600 | -69 | 6 | TAATTGGTGTGATAACTTT |
| Serratia proteamaculans 568 | Spro_4321 | -70 | 6.2 | AAATTGGTGTGATAACTTT |
|
Position: -105
Score: 5.8 Sequence: TAAGTGGTATAACAAGTCC
Locus tag: YfreA_01004053
|
||||
| YfreA_01004053 | -105 | 5.8 | TAAGTGGTATAACAAGTCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: D-galacturonate transcriptional repressor, GntR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04496 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03522 | -48 | 5.8 | AAAGTGGTATAACAAATCG |
| Enterobacter sp. 638 | Ent638_3548 | -45 | 6.1 | AAAGTGGTATAACAAATCA |
| Yersinia pestis KIM | y3602 | -105 | 5.8 | TAAGTGGTATAACAAATCC |
| Serratia proteamaculans 568 | Spro_4323 | -57 | 5.8 | TAAGTGGTATAACAAATCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 5.9 | TAAGTGGTATAACAAATCA |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG |