Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NadR regulog to Yersinia frederiksenii ATCC 33641

Reference regulog properties
Source regulog: NadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: NadR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: NAD
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia frederiksenii ATCC 33641
Orthologous TF(s) YfreA_01002516
Regulated genes 2
Built upon 27 sites [see more]
Predicted regulatory interactions in Yersinia frederiksenii ATCC 33641
Locus tag Position Score Sequence
Position: -85
Score: 6
Sequence: TGTTTAGGATAAAAAACA
Locus tag: YfreA_01002381
YfreA_01002381 -85 6 TGTTTAGGATAAAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadA
Ortholog function: Quinolinate synthetase (EC 4.1.99.-)
Escherichia coli str. K-12 substr. MG1655 b0750 -90 6.4 TGTTTAGCATATAAAACA
Salmonella typhimurium LT2 STM0756 -90 6.4 TGTTTAGCATATAAAACA
Citrobacter koseri ATCC BAA-895 CKO_02390 -88 6.4 TGTTTAGCATATAAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00754 -88 6.4 TGTTTAGCATATAAAACA
Enterobacter sp. 638 Ent638_1241 -92 6.5 TGTTTAGTATATAAAACA
Erwinia amylovora ATCC 49946 EAM_1187 -125 6.2 TGTTTATCATATAAAACA
Yersinia pestis KIM y3052 -95 6 TGTTTAGGATAAAAAACA
Serratia proteamaculans 568 Spro_1282 -154 5.3 TTTTTAATGAATTAAACA
-82 6.4 TGTTTAGTATATAAAACG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1378 -81 5.7 TGTTTAGGATAAAAAACT
Photorhabdus luminescens subsp. laumondii TTO1 plu1468 -94 6.6 TGTTTAGTATATTAAACA
Position: -28
Score: 5.7
Sequence: TGTTTAGTGCACTAAACA
Locus tag: YfreA_01002516
YfreA_01002516 -28 5.7 TGTTTAGTGCACTAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadR
Ortholog function: NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
Serratia proteamaculans 568 Spro_0668 -26 6.3 TGTTTAGCATATTAAACG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0463 -31 5.6 TGTTTAGTAGGCTAAACA
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