Propagation of FadR regulog to Yersinia frederiksenii ATCC 33641
| Source regulog: | FadR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia frederiksenii ATCC 33641 |
| Orthologous TF(s) | YfreA_01002712 |
| Regulated genes | 10 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -85
Score: 3.7 Sequence: CGCTGATCGGACTTGTT
Locus tag: YfreA_01000692
|
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| YfreA_01000692 | -85 | 3.7 | CGCTGATCGGACTTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabB | ||||
| Ortholog function: 3-oxoacyl-(acyl carrier protein) synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2323 | -83 | 3.3 | GGCTGATCGGACTTGTT |
| Salmonella typhimurium LT2 | STM2378 | -84 | 3.3 | GGCTGATCGGACTTGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00462 | -83 | 3.3 | GGCTGATCGGACTTGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02713 | -83 | 3.8 | GTCTGATCGGACTTGTT |
| Enterobacter sp. 638 | Ent638_2871 | -82 | 3.3 | GGCTGATCGGACTTGTT |
| Erwinia amylovora ATCC 49946 | EAM_2336 | -82 | 3.9 | AGCTGATCGGACTTGTT |
| Yersinia pestis KIM | y1591 | -85 | 3.7 | CGCTGATCGGACTTGTT |
| Serratia proteamaculans 568 | Spro_3368 | -84 | 3.7 | CGCTGATCGGACTTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3063 | -86 | 3.3 | GGCTGATCGGACTTGTT |
| Edwardsiella tarda EIB202 | ETAE_2421 | -126 | 3.7 | ATCTGGTTTTACCAGCG |
| Proteus mirabilis HI4320 | PMI1795 | -89 | 3.3 | TCCTGATCGGACTTGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3184 | -96 | 3.3 | TCCTGATCGGACTTGTT |
|
Position: -63
Score: 5 Sequence: ATCAGGTCTGACCTGTT
Locus tag: YfreA_01000704
|
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| YfreA_01000704 | -63 | 5 | ATCAGGTCTGACCTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadI | ||||
| Ortholog function: FadI component of anaerobic fatty acid oxidation complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2342 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Salmonella typhimurium LT2 | STM2389 | -42 | 4.8 | ATCAGGTCAGACCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00448 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02724 | -44 | 5.1 | ATCAGGTCAGACCACTT |
| Enterobacter sp. 638 | Ent638_2882 | -48 | 5.1 | ATCAGGTCAGACCACTT |
| Yersinia pestis KIM | y1579 | -66 | 5 | ATCAGGTCAGACCTGTT |
| Serratia proteamaculans 568 | Spro_3379 | -56 | 5 | ATCAGGTCAGACCTCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3079 | -53 | 5 | ATCAGGTCTGACCTGTT |
| Proteus mirabilis HI4320 | PMI1808 | -50 | 5 | ATCAGGTCAGACCTCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3201 | -81 | 4.7 | ATCAGGTCAGACCTGTC |
|
Position: -95
Score: 4.2 Sequence: CACTGGTCTGCTTTGTC
Locus tag: YfreA_01000706
|
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| YfreA_01000706 | -95 | 4.2 | CACTGGTCTGCTTTGTC | |
| Supported by regulated orthologs from reference regulons | ||||