Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AgaR regulog to Yersinia frederiksenii ATCC 33641

Reference regulog properties
Source regulog: AgaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia frederiksenii ATCC 33641
Orthologous TF(s) YfreA_01003856
Regulated genes 2
Built upon 19 sites [see more]
Predicted regulatory interactions in Yersinia frederiksenii ATCC 33641
Locus tag Position Score Sequence
Position: -153
Score: 5.7
Sequence: TTTTCGTTTTATTTC
Position: -123
Score: 5.7
Sequence: CTTTCGTTTTCTTTT
Locus tag: YfreA_01003863
YfreA_01003863 -153 5.7 TTTTCGTTTTATTTC
-123 5.7 CTTTCGTTTTCTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaS
Ortholog function: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Escherichia coli str. K-12 substr. MG1655 b3136 -150 5.6 ATTTCGTTTTATTTC
-119 5.1 CTTTCAGTTTCTTTT
Citrobacter koseri ATCC BAA-895 CKO_04536 -252 5.3 CTTTCTTTTTCTTTC
-150 5.7 TTTTCGTTTTATTTC
-119 5.4 CTTTCGATTTCTTTT
Enterobacter sp. 638 Ent638_3577 -144 5.7 TTTTCGTTTTATTTC
-113 4.6 CTTTCACTTTCCTTT