Propagation of LexA regulog to Yersinia frederiksenii ATCC 33641
Source regulog: | LexA - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | LexA |
Regulation mode: | repressor |
Biological process: | SOS response |
Effector: | DNA damage |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Yersinia frederiksenii ATCC 33641 |
Orthologous TF(s) | YfreA_01003399 |
Regulated genes | 16 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -101
Score: 5.6 Sequence: TACTGTATGATTGTACAGTA
Locus tag: YfreA_01000004
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YfreA_01000004 | -101 | 5.6 | TACTGTATGATTGTACAGTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: recA | ||||
Ortholog function: Recombinase A | ||||
Escherichia coli str. K-12 substr. MG1655 | b2699 | -79 | 5.7 | TACTGTATGAGCATACAGTA |
Salmonella typhimurium LT2 | STM2829 | -84 | 5.7 | TACTGTATGAGCATACAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_04050 | -96 | 5.5 | TACTGTATGACTGTACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03031 | -90 | 5.8 | TACTGTATGACCATACAGTA |
Enterobacter sp. 638 | Ent638_3174 | -92 | 5.9 | TACTGTATGACTATACAGTA |
Erwinia amylovora ATCC 49946 | EAM_2640 | -88 | 6.1 | TACTGTATGATTATACAGTA |
Yersinia pestis KIM | y0881 | -102 | 5.6 | TACTGTATGATTGTACAGTA |
Serratia proteamaculans 568 | Spro_0841 | -100 | 5.8 | TACTGTATGACCATACAGTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3369 | -101 | 5.7 | TGCTGTATGTGTATACAGTA |
Edwardsiella tarda EIB202 | ETAE_2861 | -63 | 5.7 | TACTGTATGAGCATACAGTA |
Proteus mirabilis HI4320 | PMI0375 | -102 | 6.1 | TACTGTATGATTATACAGTA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1249 | -100 | 5.8 | TGCTGTATGATTATACAGTA |
Position: -191
Score: 4.7 Sequence: TACTGTATAAATAACCATAA
Locus tag: YfreA_01000227
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YfreA_01000227 | -191 | 4.7 | TACTGTATAAATAACCATAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: polB | ||||
Ortholog function: DNA polymerase II (EC 2.7.7.7) | ||||
Escherichia coli str. K-12 substr. MG1655 | b0060 | -73 | 4.3 | GACTGTATAAAACCACAGCC |
Salmonella typhimurium LT2 | STM0097 | -73 | 4.6 | gcCTGTAcAaAataACAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_03322 | -73 | 4.7 | ACCTGTATAAAACCACAGCA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00059 | -75 | 4.2 | ACCTGTATAAAACCCCAGCG |
Enterobacter sp. 638 | Ent638_0607 | 30 | 4.6 | ACCTGTATAAAATCCCAGCA |
Erwinia amylovora ATCC 49946 | EAM_0673 | -53 | 4.9 | TACTGTATAAATAAACATGC |
Position: -40
Score: 4.9 Sequence: CACTGGATATATCAACAGCT
Locus tag: YfreA_01000844
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YfreA_01000844 | -40 | 4.9 | CACTGGATATATCAACAGCT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ydjM | ||||
Ortholog function: membrane-bound metal-dependent hydrolase | ||||
Escherichia coli str. K-12 substr. MG1655 | b1728 | -52 | 4.4 | CACTGTATAAAAATCCTATA |
-34 | 4.7 | TACTGTACGTATCGACAGTT | ||
Salmonella typhimurium LT2 | STM1321 | -52 | 4.4 | TACTGTATAAAAACCCTATA |
-34 | 5.2 | TACTGTATGAATTGACAGTT | ||
Citrobacter koseri ATCC BAA-895 | CKO_01754 | -52 | 4.4 | TACTGTATAAAAACCCTATA |
-34 | 5.2 | TACTGTATGAATTGACAGTT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01239 | -34 | 5 | TACTGTATGAATCGACAGTT |
Enterobacter sp. 638 | Ent638_1715 | -34 | 5.2 | TACTGTATGAATTGACAGTT |
Erwinia amylovora ATCC 49946 | EAM_1619 | -56 | 4.3 | TACTGTATATATTCCCTATA |
-38 | 4.8 | TACTGGATGCATTGACAGTT | ||
Yersinia pestis KIM | y1879 | -39 | 5 | TACTGGATAAATCAACAGCT |
Serratia proteamaculans 568 | Spro_2124 | -39 | 5.4 | TACTGGATAAATTAACAGTT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2409 | -36 | 5.4 | TACTGTATAAAATAACAGTT |
Edwardsiella tarda EIB202 | ETAE_1569 | -109 | 5.5 | TTCTGTATATTTATACAGCA |
Proteus mirabilis HI4320 | PMI1020 | -54 | 5.2 | CACTGTATAAATGAACAGCA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2679 | -37 | 5 | GACTGTATGGATAGACAGTT |
Position: -84
Score: 5.7 Sequence: CACTGTATAAATAAACAGTG
Locus tag: YfreA_01001008
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YfreA_01001008 | -84 | 5.7 | CACTGTATAAATAAACAGTG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sbmC | ||||
Ortholog function: DNA gyrase inhibitor | ||||
Escherichia coli str. K-12 substr. MG1655 | b2009 | -34 | 6.1 | TACTGTATATAAAAACAGTA |
Salmonella typhimurium LT2 | STM2061 | -41 | 5.5 | TACTGTACATTCATACAGCA |
Citrobacter koseri ATCC BAA-895 | CKO_00775 | -157 | 5.7 | TGCTGTGTTTATATACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02467 | -42 | 5.8 | AGCTGTATATTCATACAGTA |
Enterobacter sp. 638 | Ent638_2577 | -35 | 5.3 | TAGTGTATAAATACACAGTA |
Position: -85
Score: 5.7 Sequence: TCCTGTTTATTCATACAGTT
Locus tag: YfreA_01001333
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YfreA_01001333 | -85 | 5.7 | TCCTGTTTATTCATACAGTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ftsK | ||||
Ortholog function: DNA translocase FtsK | ||||
Escherichia coli str. K-12 substr. MG1655 | b0890 | -96 | 5 | TCCTGTTAATCCATACAGCA |
Salmonella typhimurium LT2 | STM0960 | -96 | 5 | TCCTGTTAATCCATACAGCA |
Citrobacter koseri ATCC BAA-895 | CKO_02181 | -39 | 5 | TCCTGTTAATCCATACAGCA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00922 | -97 | 5 | TCCTGTTAATCCATACAGCA |
Enterobacter sp. 638 | Ent638_1414 | -96 | 5 | TCCTGTTAATCCATACAGCA |
Erwinia amylovora ATCC 49946 | EAM_1329 | -80 | 4.9 | TCCTGTGAATTCATACAGGT |
Yersinia pestis KIM | y2800 | -86 | 5.7 | TCCTGTTTATTCATACAGTT |
Serratia proteamaculans 568 | Spro_1683 | -85 | 5.7 | TCCTGTTTATTCATACAGTT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2647 | -78 | 5 | TCCTGTGAATTTATACAGTC |
Edwardsiella tarda EIB202 | ETAE_2199 | -114 | 5.4 | TCCTGTGTATGTATACAGTT |
Proteus mirabilis HI4320 | PMI0697 | -83 | 5.6 | TCCTGTTTATGTATACAGTT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1601 | -81 | 5.5 | TCCTGTTTATGCATACAGTT |
Position: -40
Score: 5.7 Sequence: TACTGTATATGCATACAGCA
Locus tag: YfreA_01001388
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YfreA_01001388 | -40 | 5.7 | TACTGTATATGCATACAGCA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sulA | ||||
Ortholog function: Cell division inhibitor sulA | ||||
Escherichia coli str. K-12 substr. MG1655 | b0958 | -42 | 5.6 | TACTGTACATCCATACAGTA |
Salmonella typhimurium LT2 | STM1071 | -41 | 6.2 | TACTGTATGAATATACAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_02110 | -41 | 6 | TACTGTATATCCATACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00987 | -39 | 6 | TACTGTATATGCATACAGTA |
Enterobacter sp. 638 | Ent638_1470 | -34 | 6.2 | TACTGTATATTCATACAGTA |
Erwinia amylovora ATCC 49946 | EAM_1378 | -40 | 5.7 | TACTGTATATCCATACAGTC |
Yersinia pestis KIM | y2734 | -39 | 6.1 | TACTGTATATACATACAGCA |
Serratia proteamaculans 568 | Spro_1755 | -41 | 5.9 | TACTGTATAAACATACAGTG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1752 | -41 | 6.1 | TACTGTATGTTCATACAGTA |
Edwardsiella tarda EIB202 | ETAE_1269 | -115 | 5.9 | TACTGTATAAGCATACAGTA |
Proteus mirabilis HI4320 | PMI0786 | -39 | 6.3 | TACTGTATATACATACAGTA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1776 | -40 | 6 | TACTGTATATTAATACAGTT |
Position: -41
Score: 6.1 Sequence: TACTGTATAAATAAACAGTA
Locus tag: YfreA_01001432
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YfreA_01001432 | -41 | 6.1 | TACTGTATAAATAAACAGTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dinI | ||||
Ortholog function: DNA damage-inducible protein | ||||
Escherichia coli str. K-12 substr. MG1655 | b1061 | -39 | 5.6 | ACCTGTATAAATAACCAGTA |
Salmonella typhimurium LT2 | STM1162 | -39 | 6.1 | AACTGTATATATATCCAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_02002 | -39 | 5.9 | AACTGTATAAATACACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01073 | -39 | 5.9 | TACTGTATAAATAACCAGTA |
Enterobacter sp. 638 | Ent638_1575 | -39 | 5.8 | GACTGTATAAATAAACAGTA |
Erwinia amylovora ATCC 49946 | EAM_1429 | -38 | 5.8 | AACTGTATATATTTACAGTT |
Yersinia pestis KIM | y1747 | -41 | 6.1 | TACTGTATAAATAAACAGTA |
Serratia proteamaculans 568 | Spro_1895 | -39 | 6 | AACTGTATAAATATCCAGTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1786 | -38 | 5.9 | AACTGTATAAATAAACAGTT |
Edwardsiella tarda EIB202 | ETAE_2072 | -42 | 5.7 | AGCTGTATATATTTACAGTA |
Position: -68
Score: 5.5 Sequence: TACTGTATATAAAACCAGTC
Locus tag: YfreA_01001632
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YfreA_01001632 | -68 | 5.5 | TACTGTATATAAAACCAGTC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: recN | ||||
Ortholog function: DNA repair protein RecN | ||||
Escherichia coli str. K-12 substr. MG1655 | b2616 | -68 | 5.7 | TACTGTATATAAAACCAGTT |
-46 | 4.9 | TACTGTACACAATAACAGTA | ||
-28 | 4.7 | TAATGGTTTTTCATACAGGA | ||
Salmonella typhimurium LT2 | STM2684 | -68 | 5.6 | TACTGTATAAAAAACCAGTT |
-46 | 5.3 | TACTGTATTTAATTACAGTC | ||
-28 | 4.5 | TCATGGTTTTTCATACAGGA | ||
Citrobacter koseri ATCC BAA-895 | CKO_03938 | -68 | 5.6 | TACTGTATAAAAAACCAGTT |
-46 | 5.1 | TACTGTATGTAATCACAGTC | ||
-28 | 4.5 | TCATGGTTTTTCATACAGGA | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02938 | -68 | 5.2 | TACTGGATAAAAAACCAGTC |
-46 | 5.2 | TACTGTACGAAAACACAGTA | ||
-28 | 4.9 | TATTGGTTTTTCATACAGGA | ||
Enterobacter sp. 638 | Ent638_3096 | -68 | 5.6 | TACTGTATAAAAAACCAGTT |
-46 | 5.8 | TACTGTATAGAAATACAGTT | ||
Erwinia amylovora ATCC 49946 | EAM_2529 | -68 | 5.7 | TACTGTTTATAAAACCAGTA |
-46 | 4.3 | TACTGTATGAAAAACCATAT | ||
-28 | 4.8 | ATCTGTGTTTTCATACAGGA | ||
Yersinia pestis KIM | y3075 | 39 | 5.5 | TACTGTATATAAAACCAGTC |
61 | 4.5 | TACTGTGTTCAAATACAGAC | ||
Serratia proteamaculans 568 | Spro_3686 | -68 | 5.5 | TACTGTATATAAAACCAGTC |
-46 | 5 | TACTGTATGAAACCACAGTT | ||
-28 | 4.5 | TTATGTATTTATACACAGGA | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0840 | -61 | 5.7 | TACTGTATATAAAACCAGTT |
-39 | 5.4 | TACTGTATGTAAACACAGTC | ||
Edwardsiella tarda EIB202 | ETAE_2737 | -68 | 5.6 | TACTGTATAAAAAACCAGTT |
-46 | 4.6 | TACTGGCATTAAACACAGTA | ||
Proteus mirabilis HI4320 | PMI1902 | -66 | 5.6 | TACTGTATAAAAAACCAGTT |
-44 | 5.1 | TACTGTATGTAATTACAGAT | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu3374 | -68 | 5.6 | TACTGTATAAAAAACCAGTT |
-46 | 4.8 | TACTGTATGAAGATACAGAG | ||
-28 | 4.5 | AGGTGTTTTTATACACAGGA | ||
Position: -35
Score: 5.4 Sequence: GACTGTATACTTATACAGTG
Locus tag: YfreA_01001956
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YfreA_01001956 | -35 | 5.4 | GACTGTATACTTATACAGTG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dinB | ||||
Ortholog function: DNA polymerase IV (EC 2.7.7.7) | ||||
Escherichia coli str. K-12 substr. MG1655 | b0231 | -34 | 4.8 | CACTGTATACTTTACCAGTG |
Salmonella typhimurium LT2 | STM0313 | -35 | 5.4 | TACTGTACACTTAAACAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_02960 | -35 | 5.8 | TACTGTATACTTAAACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00247 | 1 | 5.2 | TGCTGTATGGGTATACAGTG |
Enterobacter sp. 638 | Ent638_0762 | -37 | 5.8 | TACTGTATACTTATCCAGTA |
Erwinia amylovora ATCC 49946 | EAM_0894 | -36 | 5.4 | GACTGTATACTTATCCAGTA |
Yersinia pestis KIM | y0959 | -41 | 5.3 | GACTGTATACTTATACAGCT |
Serratia proteamaculans 568 | Spro_0962 | -35 | 5.7 | GCCTGTATATTTATACAGTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3468 | -36 | 5.5 | ATCTGTATATTCATACAGTA |
Edwardsiella tarda EIB202 | ETAE_0788 | -42 | 5.6 | TGCTGTATACTCATACAGTA |
Proteus mirabilis HI4320 | PMI0362 | -39 | 6.1 | TACTGTATATTTAAACAGTA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1239 | -42 | 4.8 | TTATGTATGTTTATACAGTT |
Position: -100
Score: 5.3 Sequence: AGCTGGTTTTATATCCAGTA
Locus tag: YfreA_01002352
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YfreA_01002352 | -100 | 5.3 | AGCTGGTTTTATATCCAGTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uvrB | ||||
Ortholog function: Excinuclease ABC subunit B | ||||
Escherichia coli str. K-12 substr. MG1655 | b0779 | -94 | 5.6 | AACTGTTTTTTTATCCAGTA |
Salmonella typhimurium LT2 | STM0798 | -93 | 5.6 | TACTGTTTTTTCATCCAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_02348 | -93 | 5.4 | CACTGTTTTTTCATCCAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00804 | -95 | 5.7 | CACTGTTTAAATATCCAGTA |
Enterobacter sp. 638 | Ent638_1271 | -95 | 5.4 | CACTGGATTTACATCCAGTA |
Erwinia amylovora ATCC 49946 | EAM_1216 | -96 | 4.7 | AGCTGTGATTATATCCAGTG |
Yersinia pestis KIM | y3026 | -97 | 5.3 | AGCTGGTTTTATATCCAGTA |
Serratia proteamaculans 568 | Spro_1317 | -130 | 5.3 | AGCTGGTTTTATATCCAGTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2820 | -232 | 5.6 | TgCTGTtTtTATATcCAGTA |
Edwardsiella tarda EIB202 | ETAE_2547 | -106 | 5.2 | AGCTGGGTAAATATCCAGTA |
Proteus mirabilis HI4320 | PMI0607 | -51 | 5.3 | AGCTGGATTTTTATCCAGTA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1491 | -56 | 5.3 | AGCTGGTTTTATATCCAGTA |
Position: -87
Score: 4.6 Sequence: CTCTGTATAAATTCACAGTG
Locus tag: YfreA_01002546
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YfreA_01002546 | -87 | 4.6 | CTCTGTATAAATTCACAGTG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uvrD | ||||
Ortholog function: ATP-dependent DNA helicase II | ||||
Escherichia coli str. K-12 substr. MG1655 | b3813 | -76 | 4.9 | ATCTGTATATATACCCAGCT |
Salmonella typhimurium LT2 | STM3951 | -125 | 4.8 | TTCTGTATAAATTCCCAGTT |
Citrobacter koseri ATCC BAA-895 | CKO_00155 | -76 | 5 | TATTGTATATATACCCAGCT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04312 | -53 | 4.6 | CTCTGTATATATTAACAGGG |
Enterobacter sp. 638 | Ent638_3979 | -68 | 5.1 | TATTGTATAAATCAACAGTA |
Erwinia amylovora ATCC 49946 | EAM_0187 | -55 | 5 | ACCTGGTTATTTAACCAGTG |
Yersinia pestis KIM | y0389 | -82 | 4.7 | CCCTGTGTAAATCTACAGTG |
Serratia proteamaculans 568 | Spro_0186 | -56 | 4.4 | CTCTGTATAAATTCCCAGTG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4179 | -71 | 4.5 | ATCTGTATAAATCACCAGTG |
Edwardsiella tarda EIB202 | ETAE_0126 | -65 | 5 | TTCTGTATAAATCTCCAGTA |
Proteus mirabilis HI4320 | PMI3340 | -47 | 5.1 | TTCTGTATATATCCACAGTA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4636 | -55 | 5 | TTCTGTATAAAAACACAGCA |
Position: -58
Score: 4.4 Sequence: GGCTGGATATCCATCCAGCC
Locus tag: YfreA_01002678
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YfreA_01002678 | -58 | 4.4 | GGCTGGATATCCATCCAGCC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ruvA | ||||
Ortholog function: Holliday junction helicase subunit A | ||||
Escherichia coli str. K-12 substr. MG1655 | b1861 | -69 | 5 | CGCTGGATATCTATCCAGCA |
Salmonella typhimurium LT2 | STM1895 | -71 | 4.8 | ATCTGGATAAACATCCAGTC |
Citrobacter koseri ATCC BAA-895 | CKO_01099 | -70 | 4.6 | GGCTGGATATCTATCCAGCC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02376 | -69 | 4.6 | GGCTGGATATCTATCCAGCC |
Enterobacter sp. 638 | Ent638_2430 | -69 | 4.6 | GGCTGGATAAACATCCAGCC |
Erwinia amylovora ATCC 49946 | EAM_2004 | -68 | 5 | AGCTGGATATCTATCCAGCT |
Yersinia pestis KIM | y2253 | -244 | 4.4 | GGCTGGATATCCATCCAGCC |
Serratia proteamaculans 568 | Spro_2777 | -91 | 4.6 | GGCTGGATATTCATCCAGCC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2492 | -84 | 4.9 | TGCTGGATATTCATCCAGCC |
Edwardsiella tarda EIB202 | ETAE_1439 | -74 | 4.6 | GGCTGGATATTCATCCAGCC |
Proteus mirabilis HI4320 | PMI1115 | -68 | 4.5 | GGCTGGATATACGTCCAGCT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2111 | -85 | 4.6 | GGCTGGATATGCATCCAGCT |
Position: -158
Score: 5.1 Sequence: ACCTGAATGGATATCCAGTA
Locus tag: YfreA_01003388
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YfreA_01003388 | -158 | 5.1 | ACCTGAATGGATATCCAGTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ssb | ||||
Ortholog function: single-strand binding protein | ||||
Escherichia coli str. K-12 substr. MG1655 | b4059 | -170 | 5.5 | ACCTGAATGAATATACAGTA |
Salmonella typhimurium LT2 | STM4256 | -167 | 5.7 | ACCTGTTTGAATATACAGTA |
Citrobacter koseri ATCC BAA-895 | CKO_03842 | -168 | 5.3 | ACCTGAATGGATATACAGTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04446 | -166 | 5.5 | ACCTGAATGAATATACAGTA |
Enterobacter sp. 638 | Ent638_0262 | -165 | 5.7 | ACCTGTTTGAATATACAGTA |
Erwinia amylovora ATCC 49946 | EAM_0308 | -171 | 4.5 | GCCTGAATGGATAACCAGTG |
Yersinia pestis KIM | y0582 | -158 | 4.8 | ACCTGAATGGATATCCAGTG |
Serratia proteamaculans 568 | Spro_4439 | -157 | 5.2 | ACCTGAATGAATATCCAGTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3690 | -158 | 5.5 | AACTGAATGAATATCCAGTA |
Position: -274
Score: 5.1 Sequence: TACTGGATATCCATTCAGGT
Locus tag: YfreA_01003389
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YfreA_01003389 | -274 | 5.1 | TACTGGATATCCATTCAGGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uvrA | ||||
Ortholog function: excinuclease ABC subunit A | ||||
Escherichia coli str. K-12 substr. MG1655 | b4058 | -103 | 5.5 | TACTGTATATTCATTCAGGT |
Salmonella typhimurium LT2 | STM4254 | -100 | 5.7 | TACTGTATATTCAAACAGGT |
Citrobacter koseri ATCC BAA-895 | CKO_03843 | -102 | 5.3 | TACTGTATATCCATTCAGGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04445 | -105 | 5.5 | TACTGTATATTCATTCAGGT |
Enterobacter sp. 638 | Ent638_0261 | -100 | 5.7 | TACTGTATATTCAAACAGGT |
Erwinia amylovora ATCC 49946 | EAM_0307 | -101 | 4.5 | CACTGGTTATCCATTCAGGC |
Yersinia pestis KIM | y0580 | -318 | 4.8 | CACTGGATATCCATTCAGGT |
Serratia proteamaculans 568 | Spro_4440 | -140 | 5.2 | TACTGGATATTCATTCAGGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3689 | -107 | 5.5 | TACTGGATATTCATTCAGTT |
Edwardsiella tarda EIB202 | ETAE_3184 | -92 | 5.3 | TACTGGATATCCATTCAGTT |
Proteus mirabilis HI4320 | PMI2746 | -84 | 5.3 | TACTGTATATCCATTCAGCT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4350 | -209 | 5.3 | TACTGTATATCTAATCAGTC |
Position: -47
Score: 5 Sequence: ACCTGTATATACTCACAGCA
Position: -26
Score: 5.2 Sequence: GACTGTATAAACAAACAGGG
Locus tag: YfreA_01003399
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YfreA_01003399 | -47 | 5 | ACCTGTATATACTCACAGCA | |
-26 | 5.2 | GACTGTATAAACAAACAGGG | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: lexA | ||||
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88) | ||||
Escherichia coli str. K-12 substr. MG1655 | b4043 | -47 | 5.1 | TGCTGTATATACTCACAGCA |
-26 | 5.2 | AACTGTATATACACCCAGGG | ||
Salmonella typhimurium LT2 | STM4237 | -47 | 5.2 | AACTGTATATACTCACAGCA |
-26 | 4.4 | GATTGTATATACACCCAGGG | ||
Citrobacter koseri ATCC BAA-895 | CKO_03872 | -47 | 5 | AGCTGTATATACTCACAGCA |
-26 | 5.2 | AACTGTATATACACCCAGGG | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04431 | -47 | 5 | AGCTGTATATACTCACAGCA |
-26 | 5.2 | AACTGTATATACACCCAGGG | ||
Enterobacter sp. 638 | Ent638_0247 | -47 | 5 | GACTGTATATACTCACAGCA |
-26 | 5.2 | AACTGTATATACACCCAGGG | ||
Erwinia amylovora ATCC 49946 | EAM_0264 | -46 | 4.9 | ACCTGTATATACTCACAGTC |
-26 | 5 | GACTGTATAAACAACCAGGG | ||
Yersinia pestis KIM | y0572 | -47 | 5 | AGCTGTATATACTCACAGCA |
-26 | 5.4 | AACTGTATAAACAAACAGGG | ||
Serratia proteamaculans 568 | Spro_4460 | -47 | 5 | ACCTGTATATACTCACAGCA |
-26 | 5.2 | GACTGTATAAACAAACAGGG | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0630 | -47 | 5 | ACCTGTATATACTCACAGCA |
-26 | 5 | GACTGTATAAACAACCAGGG | ||
Edwardsiella tarda EIB202 | ETAE_0230 | -47 | 5 | ACCTGTATATACTCACAGCA |
-26 | 5 | AACTGTATAAACGAACAGGG | ||
Proteus mirabilis HI4320 | PMI2749 | -47 | 4.9 | ACCTGTATATACTCACAGTC |
-26 | 5.2 | GACTGTATAAACAAACAGGG | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu4374 | -26 | 5.2 | GACTGTATAAACAAACAGGG |
Position: -47
Score: 5.3 Sequence: TACTGTGTTTATGTACAGTT
Locus tag: YfreA_01003910
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YfreA_01003910 | -47 | 5.3 | TACTGTGTTTATGTACAGTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yebG | ||||
Ortholog function: SOS regulon DNA damage-inducible protein | ||||
Escherichia coli str. K-12 substr. MG1655 | b1848 | -37 | 5.3 | TACTGTATAAAATCACAGTT |
Salmonella typhimurium LT2 | STM1882 | -37 | 5.5 | TACTGTATATAAACACAGGT |
Citrobacter koseri ATCC BAA-895 | CKO_01118 | -38 | 4.8 | TGCTGTACATAATTACAGGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02363 | -35 | 5.9 | TACTGTATAAAAATACAGTG |
Enterobacter sp. 638 | Ent638_1887 | -33 | 5.3 | CACTGTATATAATTACAGTG |
Erwinia amylovora ATCC 49946 | EAM_1993 | -35 | 5.7 | TACTGTATAAAAACACAGTT |
Yersinia pestis KIM | y2530 | -47 | 5.2 | CACTGTGATTATATACAGTT |
Serratia proteamaculans 568 | Spro_2803 | -44 | 6.1 | TACTGTATAAAAATACAGTA |
Edwardsiella tarda EIB202 | ETAE_1833 | -31 | 5.8 | TACTGTATATAAAAACAGTG |