Propagation of UxuR regulog to Yersinia frederiksenii ATCC 33641
| Source regulog: | UxuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia frederiksenii ATCC 33641 |
| Orthologous TF(s) | YfreA_01001256 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -67
Score: 4.2 Sequence: AAACTGGTCTAACAACTT
Locus tag: YfreA_01001257
|
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| YfreA_01001257 | -67 | 4.2 | AAACTGGTCTAACAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeiQ | ||||
| Ortholog function: paralog of D-mannonate oxidoreductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2172 | -176 | 4.1 | AATTTATTATACCAATCT |
| Yersinia pestis KIM | y2903 | -363 | 4.3 | AtgTTGtTatACCgATTT |
| -250 | 3.9 | tAtTgGacTtACCAATTT | ||
| -92 | 4.2 | AAAcTGGTctAaCAAcTT | ||
|
Position: -294
Score: 4.5 Sequence: AAGTTGTTAGACCAGTTT
Locus tag: YfreA_01001258
|
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| YfreA_01001258 | -294 | 4.5 | AAGTTGTTAGACCAGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4322 | -180 | 5.4 | GATGTGGTTAACCAATTT |
| Salmonella typhimurium LT2 | STM3135 | -336 | 5.6 | AAATTGGTTGACCAATCA |
| -149 | 5.2 | GATTTGGTTAGCCAATTT | ||
| Yersinia pestis KIM | y2902 | -510 | 4.5 | AAgTTGtTagACCAgTTT |
| -352 | 4 | AAATTGGTaAgtCcAaTa | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1093 | -109 | 5.2 | TAATTGGTCAATCAATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0170 | -77 | 5.7 | TTTTTGGTTGACCAATTT |
|
Position: -223
Score: 5.3 Sequence: AAGTTGGTTAACCAATAC
Locus tag: YfreA_01001611
|
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| YfreA_01001611 | -223 | 5.3 | AAGTTGGTTAACCAATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntP | ||||
| Ortholog function: Fructuronate transporter GntP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4321 | -177 | 5.4 | AAATTGGTTAACCACATC |
| -71 | 5.6 | ACAATGGTTGACCAATTT | ||
| Yersinia pestis KIM | y3426 | -226 | 5.2 | AACTTGGTTAACCAATAC |
| Edwardsiella tarda EIB202 | ETAE_1036 | -70 | 5.1 | TTATTGGTCAACCAAAAA |
| -29 | 5.8 | AAATTGGTTGACCAAATG | ||
|
Position: -216
Score: 5.5 Sequence: GTTTTGGTAAACCAATTT
Locus tag: YfreA_01001770
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| YfreA_01001770 | -216 | 5.5 | GTTTTGGTAAACCAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaT | ||||
| Ortholog function: Putative MFS superfamily hexuronate transporter | ||||
| Yersinia pestis KIM | y3232 | -217 | 5.2 | ATTTTGGTGAACCAATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1967 | -162 | 5.9 | AATTTGGTAAACCAATTT |
|
Position: -174
Score: 5.6 Sequence: AAATTGGTTTACCAAAAC
Locus tag: YfreA_01001771
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| YfreA_01001771 | -174 | 5.6 | AAATTGGTTTACCAAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: periplasmic binding protein/LacI transcriptional regulator | ||||
| Yersinia pestis KIM | y3231 | -194 | 5.4 | ATATTGGTTCACCAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -176 | 6 | AAATTGGTTTACCAAATT |