Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DeoR regulog to Yersinia pseudotuberculosis IP 32953

Reference regulog properties
Source regulog: DeoR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Deoxyribonucleoside utilization
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pseudotuberculosis IP 32953
Orthologous TF(s) YPTB1353
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Yersinia pseudotuberculosis IP 32953
Locus tag Position Score Sequence
Position: -117
Score: 4.5
Sequence: TATTATCATCATTACA
Locus tag: YPTB0582
YPTB0582 -117 4.5 TATTATCATCATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoA
Ortholog function: thymidine phosphorylase
Escherichia coli str. K-12 substr. MG1655 b4382 -60 6 TGTTAGAATACTAACA
Salmonella typhimurium LT2 STM4568 -44 5.6 TGTTAGAATATTAACA
Citrobacter koseri ATCC BAA-895 CKO_03409 -45 6 TGTTAGAATACTAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04838 -246 5.7 TGTTAGAATTATCACA
-69 5.4 TGTTACAATAGTAACA
Enterobacter sp. 638 Ent638_0542 -62 5.9 TGTTAGAATACTCACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0728 -185 5.4 TGTTGAAATAATCACA
Edwardsiella tarda EIB202 ETAE_0487 -104 5.3 TGTTCAAATAATCACA
Proteus mirabilis HI4320 PMI2415 -302 4.3 TGTGATTCTGATCACA
-259 4 TTTTATTATTGTGACA
Position: -44
Score: 5.3
Sequence: TGTTATGATTATCACA
Locus tag: YPTB1354
YPTB1354 -44 5.3 TGTTATGATTATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoC2
Ortholog function: deoxyribose-phosphate aldolase
Yersinia pestis KIM y2860 -105 4.3 TGTAATTTAAATAACA
-44 5.3 TGTTATGATTATCACA
Serratia proteamaculans 568 Spro_1632 -165 4.8 TGTTACTTAAATAACA
-59 5.5 TGTTATTATTCTAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2684 -109 5.5 TGTTATTAAAATAACA
-79 4.3 TGTTATTTTTGTGACA
Proteus mirabilis HI4320 PMI3512 -146 5.4 TGTTAGAATAGTTACA
-105 4.5 TGTTATTTAAATATCA
-54 4.8 TGTTGCCAAACTAACA