Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AllR regulog to Yersinia intermedia ATCC 29909

Reference regulog properties
Source regulog: AllR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Allantoin utilization
Effector: Allantoin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia intermedia ATCC 29909
Orthologous TF(s) YintA_01003314
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Yersinia intermedia ATCC 29909
Locus tag Position Score Sequence
Position: -215
Score: 6.7
Sequence: TTGGAAAAATTTTCCAA
Locus tag: YintA_01003312
YintA_01003312 -215 6.7 TTGGAAAAATTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allS
Ortholog function: DNA-binding transcriptional activator of the allD operon
Escherichia coli str. K-12 substr. MG1655 b0504 -124 6.6 TTGGAATATTTTTCCAA
Salmonella typhimurium LT2 STM0514 -122 6.6 TTGGAATATTTTTCCAA
Position: -125
Score: 6.7
Sequence: TTGGAAAATTTTTCCAA
Locus tag: YintA_01003313
YintA_01003313 -125 6.7 TTGGAAAATTTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allA
Ortholog function: ureidoglycolate hydrolase
Escherichia coli str. K-12 substr. MG1655 b0505 -122 6.6 TTGGAAAAATATTCCAA
Salmonella typhimurium LT2 STM0515 -121 6.6 TTGGAAAAATATTCCAA
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