Propagation of FruR regulog to Photorhabdus luminescens subsp. laumondii TTO1
| Source regulog: | FruR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | activator (repressor) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | Fructose-1-phosphate; Fructose-1,6-diphosphate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Photorhabdus luminescens subsp. laumondii TTO1 |
| Orthologous TF(s) | plu3664 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -241
Score: 4.2 Sequence: GCTGAAACAATACAAG
Position: 33
Score: 4.2 Sequence: CTTGAATGGTTTTTGT
Locus tag: plu0395
|
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| plu0395 | -241 | 4.2 | GCTGAAACAATACAAG | |
| 33 | 4.2 | CTTGAATGGTTTTTGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: Catabolite gene activator (cAMP receptor protein), CRP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -220 | 4.3 | GCTGAAGCGAGACACC |
| Salmonella typhimurium LT2 | STM3466 | -225 | 4.3 | GCTGAAGCGAGACACC |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -227 | 4.3 | GCTGAAGCGAGACACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -224 | 4.3 | GCTGAAGCGAGACACC |
| Enterobacter sp. 638 | Ent638_3784 | -228 | 4.3 | GCTGAAGCGAGACACC |
| Erwinia amylovora ATCC 49946 | EAM_3225 | -284 | 4.4 | GCTGAAGCGAGACAAC |
| Yersinia pestis KIM | y3956 | -255 | 4.9 | GCTGAAGCGATACAAC |
| Serratia proteamaculans 568 | Spro_4580 | -300 | 4.4 | GCTGAAGCGAGACAAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4064 | -296 | 4.4 | GCTGAAGCGAGACAAC |
| Edwardsiella tarda EIB202 | ETAE_3299 | -242 | 4.5 | GCTGAAGCGAGACAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0395 | -241 | 4.2 | GCTGAAACAATACAAG |
|
Position: -139
Score: 5.2 Sequence: GCTGAATCGTTTCATT
Locus tag: plu0955
|
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| plu0955 | -139 | 5.2 | GCTGAATCGTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Salmonella typhimurium LT2 | STM3070 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -137 | 5.4 | GCTGAAGCGTTTCAGT |
| Enterobacter sp. 638 | Ent638_3340 | -139 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -131 | 5.4 | GCTGAAGCGTTTCAGT |
| Yersinia pestis KIM | y3309 | -161 | 5.4 | GCTGAAGCGTTTCAGT |
| Serratia proteamaculans 568 | Spro_3946 | -211 | 5.4 | GCTGAAGCGTTTCAGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -119 | 5.4 | GCTGAAGCGTTTCAGT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -136 | 5.4 | GCTGAAGCGTTTCAGT |
| Proteus mirabilis HI4320 | PMI0241 | -135 | 5.1 | GCTGAACCGTTTCAGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0955 | -139 | 5.2 | GCTGAATCGTTTCATT |
|
Position: -104
Score: 5.3 Sequence: GTTGAAACGTTTCAGT
Locus tag: plu1992
|
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| plu1992 | -104 | 5.3 | GTTGAAACGTTTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Salmonella typhimurium LT2 | STM2206 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | 26 | 5.1 | CTTGAAACGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Enterobacter sp. 638 | Ent638_2763 | -36 | 4.8 | GCTGAAACGATTCAAG |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -35 | 4.8 | GCTGAAACGATTCAAA |
| Yersinia pestis KIM | y2887 | -36 | 5.3 | GCTGAAACGATTCAAT |
| Serratia proteamaculans 568 | Spro_3230 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -37 | 5.3 | GCTGAAACGATTCAAC |
| Edwardsiella tarda EIB202 | ETAE_2303 | -56 | 5.3 | GCTGAAACGATTCAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -104 | 5.3 | GTTGAAACGTTTCAGT |
|
Position: -162
Score: 4.5 Sequence: GCTGAAAGGAATCAGC
Locus tag: plu2496
|
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| plu2496 | -162 | 4.5 | GCTGAAAGGAATCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -264 | 4.6 | GCTGAAAGGTGTCAGC |
| Salmonella typhimurium LT2 | STM1749 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -265 | 4.6 | GCTGAAAGGTGTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -260 | 4.5 | GCTGAAAGGTATCAGC |
| Enterobacter sp. 638 | Ent638_2304 | -276 | 4.5 | GCTGAAAGGTATCAGC |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -246 | 4.6 | GCTGAATGGTATCAGC |
| Yersinia pestis KIM | y2023 | -309 | 4.7 | GCTGAATGGTGTCAGC |
| Serratia proteamaculans 568 | Spro_2704 | -301 | 4.7 | GCTGAATGGTGTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -338 | 4.7 | GCTGAATGGTGTCAGC |
| Edwardsiella tarda EIB202 | ETAE_1508 | -288 | 4.7 | GCTGAATGGTGTCAGC |
| Proteus mirabilis HI4320 | PMI1486 | -269 | 4.6 | GCTGAAAGGTGTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -162 | 4.5 | GCTGAAAGGAATCAGC |
|
Position: -88
Score: 3.7 Sequence: ATTGACACGATTCCGC
Locus tag: plu2558
|
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| plu2558 | -88 | 3.7 | ATTGACACGATTCCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapA | ||||
| Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1779 | -87 | 3.7 | ATTGACACGATTCCGC |
| Salmonella typhimurium LT2 | STM1290 | -87 | 3.7 | ATTGACACGATTCCGC |
| Citrobacter koseri ATCC BAA-895 | CKO_01800 | -87 | 3.7 | ATTGACACGATTCCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01197 | -87 | 3.7 | ATTGACACGATTCCGC |
| Enterobacter sp. 638 | Ent638_1675 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia amylovora ATCC 49946 | EAM_1931 | -78 | 3.7 | ATTGACACGATTCCGC |
| Yersinia pestis KIM | y2165 | -78 | 3.7 | ATTGACACGATTCCGC |
| Serratia proteamaculans 568 | Spro_2728 | -87 | 3.7 | ATTGACACGATTCCGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2344 | -93 | 3.7 | ATTGACACGATTCCGC |
| Edwardsiella tarda EIB202 | ETAE_1483 | -87 | 3.7 | ATTGACACGATTCCGC |
| Proteus mirabilis HI4320 | PMI1504 | -88 | 3.7 | ATTGACACGATTCCGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2558 | -88 | 3.7 | ATTGACACGATTCCGC |
|
Position: -114
Score: 4.4 Sequence: GGTTGATCGATTCACC
Locus tag: plu2628
|
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| plu2628 | -114 | 4.4 | GGTTGATCGATTCACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppsA | ||||
| Ortholog function: Phosphoenolpyruvate synthase (EC 2.7.9.2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1702 | -102 | 4.6 | GCTTGAACGATTCACC |
| Salmonella typhimurium LT2 | STM1349 | -103 | 4.6 | GCTTGAACGATTCACC |
| Citrobacter koseri ATCC BAA-895 | CKO_01725 | -102 | 4.6 | GCTTGAACGATTCACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02160 | -108 | 4.6 | GCTTGAACGATTCACC |
| Enterobacter sp. 638 | Ent638_1745 | -103 | 4.4 | GCTTACACGATTCACC |
| Erwinia amylovora ATCC 49946 | EAM_1646 | -104 | 3.7 | GCCAGAGCGATTCAAC |
| Yersinia pestis KIM | y1930 | -193 | 4.4 | GGTTGATCGATTCACC |
| Serratia proteamaculans 568 | Spro_2174 | -132 | 4.4 | GGTTGATCGATTCACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1853 | -117 | 4.4 | GGTTGATCGATTCACC |
| Edwardsiella tarda EIB202 | ETAE_1789 | -113 | 4.4 | GGTGTAACGATTCACC |
| Proteus mirabilis HI4320 | PMI1421 | -124 | 4.4 | GGTTGATCGATTCACC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2628 | -114 | 4.4 | GGTTGATCGATTCACC |
|
Position: -88
Score: 4.8 Sequence: ACTGAAACGATTCAAT
Locus tag: plu2858
|
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| plu2858 | -88 | 4.8 | ACTGAAACGATTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruK | ||||
| Ortholog function: 1-phosphofructokinase (EC 2.7.1.56) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2168 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Salmonella typhimurium LT2 | STM2205 | -35 | 5.4 | GCTGAATCGTTTCAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00614 | 26 | 5.1 | CTTGAAACGTTTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02599 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Enterobacter sp. 638 | Ent638_2762 | -36 | 4.8 | GCTGAAACGATTCAAG |
| Erwinia amylovora ATCC 49946 | EAM_2222 | -35 | 4.8 | GCTGAAACGATTCAAA |
| Yersinia pestis KIM | y2886 | -36 | 5.3 | GCTGAAACGATTCAAT |
| Serratia proteamaculans 568 | Spro_3229 | -35 | 5.3 | GCTGAAACGATTCAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2728 | -37 | 5.3 | GCTGAAACGATTCAAC |
| Edwardsiella tarda EIB202 | ETAE_2302 | -56 | 5.3 | GCTGAAACGATTCAAT |
| Proteus mirabilis HI4320 | PMI2157 | -177 | 4.9 | TTTGAAACGATTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2858 | -88 | 4.8 | ACTGAAACGATTCAAT |
|
Position: -254
Score: 4.3 Sequence: ACTGACACGTTTTAGC
Position: -73
Score: 3.8 Sequence: CTTGAATCGATGTGGT
Locus tag: plu3089
|
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| plu3089 | -254 | 4.3 | ACTGACACGTTTTAGC | |
| -73 | 3.8 | CTTGAATCGATGTGGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoA | ||||
| Ortholog function: NADH dehydrogenase I chain A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2288 | -283 | 3.6 | ACGGACACGATTCAAC |
| Salmonella typhimurium LT2 | STM2328 | -283 | 3.6 | ACGGACACGATTCAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00508 | -283 | 3.6 | ACGGACACGATTCAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02678 | -375 | 3.6 | aCgGAcaCGATTCAaC |
| Enterobacter sp. 638 | Ent638_2832 | -283 | 3.6 | ACGGACACGATTCAAC |
| Erwinia amylovora ATCC 49946 | EAM_2292 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Yersinia pestis KIM | y1630 | -257 | 4.4 | ACTGACTCGATTTAGC |
| Serratia proteamaculans 568 | Spro_3308 | -263 | 4.3 | ACTGACACGATTTAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3028 | -258 | 4.4 | ACTGACTCGATTTAGC |
| Edwardsiella tarda EIB202 | ETAE_2385 | -135 | 4.7 | GCTGGAGCGATTCGGC |
| Proteus mirabilis HI4320 | PMI1762 | -244 | 4.3 | aCTGAcaCGTTTtAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3089 | -254 | 4.3 | ACTGACACGTTTTAGC |
|
Position: -141
Score: 5.1 Sequence: GTTGAATCAATTCAGC
Position: -127
Score: 4.3 Sequence: GCTTGATTGTTTCAGT
Locus tag: plu4774
|
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| plu4774 | -141 | 5.1 | GTTGAATCAATTCAGC | |
| -127 | 4.3 | GCTTGATTGTTTCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfkA | ||||
| Ortholog function: 6-phosphofructokinase (EC 2.7.1.11) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3916 | -121 | 5.1 | CCTGAATCAATTCAGC |
| Salmonella typhimurium LT2 | STM4062 | -122 | 5.1 | CCTGAATCAATTCAGC |
| Citrobacter koseri ATCC BAA-895 | CKO_03085 | -128 | 5.1 | CCTGAATCAATTCAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04223 | -119 | 5.1 | CCTGAATCAATTCAGC |
| Enterobacter sp. 638 | Ent638_4056 | -170 | 5.1 | CCTGAATCAATTCAGC |
| Erwinia amylovora ATCC 49946 | EAM_0103 | -128 | 3.9 | CCTCAACCAATTCAGC |
| Yersinia pestis KIM | y0059 | -144 | 4.9 | CTTGAATCAATTCAGC |
| Serratia proteamaculans 568 | Spro_4807 | -141 | 4.9 | CTTGAATCAATTCAGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4307 | -136 | 5.1 | CCTGAATCAATTCAGC |
| Edwardsiella tarda EIB202 | ETAE_3450 | -219 | 5.1 | CCTGAATCAATTCAGC |
| Proteus mirabilis HI4320 | PMI3203 | -119 | 5.1 | GTTGAATCAATTCAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4774 | -141 | 5.1 | GTTGAATCAATTCAGC |