Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NsrR regulog to Photorhabdus luminescens subsp. laumondii TTO1

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Photorhabdus luminescens subsp. laumondii TTO1
Orthologous TF(s) plu4576
Regulated genes 3
Built upon 73 sites [see more]
Predicted regulatory interactions in Photorhabdus luminescens subsp. laumondii TTO1
Locus tag Position Score Sequence
Position: -191
Score: 3.9
Sequence: AATAAATTAAAGATATACC
Locus tag: plu2622
plu2622 -191 3.9 AATAAATTAAAGATATACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1369 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1760 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -191 3.9 AATAAATTAAAGATATACC
Position: -64
Score: 5.4
Sequence: GTTGCATTTAAATTACATG
Locus tag: plu3292
plu3292 -64 5.4 GTTGCATTTAAATTACATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Escherichia coli str. K-12 substr. MG1655 b2552 -47 5.7 GATGCATTTGAGATACATC
Salmonella typhimurium LT2 STM2556 -79 4.8 GATCCATTTACAATGCAAG
-47 5.8 GATGCATTTGATATACATC
Citrobacter koseri ATCC BAA-895 CKO_00235 -47 5.5 GATGTATTTGACATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02877 -47 6.3 GATGCATTTAAAATGCATC
Enterobacter sp. 638 Ent638_3037 -47 6.2 GATGCATATAAAATACATC
Yersinia pestis KIM y1321 -58 6.1 GATGCATTTAAAATACATG
Serratia proteamaculans 568 Spro_3639 -59 6 GATGCATTTAAAATGCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3251 -51 5.9 GATTCATATAAAATACAAC
Edwardsiella tarda EIB202 ETAE_2822 -45 6.2 GTTGCATTTAAAATACAAC
Proteus mirabilis HI4320 PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Photorhabdus luminescens subsp. laumondii TTO1 plu3292 -64 5.4 GTTGCATTTAAATTACATG
Position: -39
Score: 5.7
Sequence: GATGCATTTTAAATGTAAT
Locus tag: plu3742
plu3742 -39 5.7 GATGCATTTTAAATGTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehB
Ortholog function: Tellurite resistance protein TehB
Escherichia coli str. K-12 substr. MG1655 b1430 -47 5.4 AATGCATTTCAAATATACT
Salmonella typhimurium LT2 STM1608 -35 5.4 AATGCATTTCAAATATACT
Citrobacter koseri ATCC BAA-895 CKO_01467 -35 5.6 AATGCATTTAAAATATACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01940 -47 5 GGTTCCTTTAAAATGCAAC
Enterobacter sp. 638 Ent638_1975 -35 5.2 CTAGCATTTCAAATATAAT
Proteus mirabilis HI4320 PMI2116 -36 6.1 GATGTATTTAAAATGCATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3742 -39 5.7 GATGCATTTTAAATGTAAT
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