Propagation of LsrR regulog to Escherichia coli HS

Reference regulog properties
Source regulog:	LsrR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	SorC
Regulation mode:	repressor
Biological process:	Quorum sensing; Biofilm formation
Effector:	4,5-dihydroxypentan-2,3-dione
Phylum:	Proteobacteria
Propagated regulon:
Target genome	Escherichia coli HS
Orthologous TF(s)	EcHS_A1594
Regulated genes	2

Built upon 19 sites [see more]

Predicted regulatory interactions in *Escherichia coli HS*
	Locus tag	Position	Score	Sequence
Position: -216 Score: 6.6 Sequence: GAACAAATGTATTTCTGCTTTTAATTTGTTC Position: -48 Score: 6.7 Sequence: GAACAATTGCATTAAAGATTTAAATATGTTC Locus tag: EcHS_A1594
	EcHS_A1594	-216	6.6	GAACAAATGTATTTCTGCTTTTAATTTGTTC
		-48	6.7	GAACAATTGCATTAAAGATTTAAATATGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lsrR
Ortholog function: Quorum sensing transcriptional repgulator of LsrR, SorC family
Enterobacter sp. 638	Ent638_3537	-201	6.6	GAACAAATGATTTTTTGATTTAATAATGTTC
		-35	6	GAACATATGATCTAAATTTTTATAAGAGTTC
Escherichia coli str. K-12 substr. MG1655	b1512	-216	6.6	GAACAAATGTATTTCTGCTTTTAATTTGTTC
		-48	6.7	GAACAATTGCATTAAAGATTTAAATATGTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03508	-203	6.7	GAACAAATGATTTTTAAATTTAATAATGTTC
		-36	6	GAACATATGATCTAAATTTTTATAAGAGTTC
Photorhabdus luminescens subsp. laumondii TTO1	plu3142	-184	6.8	GAACATTTATCTATTTAAAAAACAATTGTTC
Salmonella typhimurium LT2	STM4073	-219	6.6	GAACAAATGTTTTTTGAAAAAGAAATTGTTC
		-53	6.5	GAACAATTGTGTTAATGATTTAGAAATGTTC

Position: -231 Score: 6.7 Sequence: GAACATATTTAAATCTTTAATGCAATTGTTC Position: -63 Score: 6.6 Sequence: GAACAAATTAAAAGCAGAAATACATTTGTTC Locus tag: EcHS_A1595
	EcHS_A1595	-231	6.7	GAACATATTTAAATCTTTAATGCAATTGTTC
		-63	6.6	GAACAAATTAAAAGCAGAAATACATTTGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lsrA
Ortholog function: Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component
Enterobacter sp. 638	Ent638_3536	-212	6	GAACTCTTATAAAAATTTAGATCATATGTTC
		-46	6.6	GAACATTATTAAATCAAAAAATCATTTGTTC
Escherichia coli str. K-12 substr. MG1655	b1513	-231	6.7	GAACATATTTAAATCTTTAATGCAATTGTTC
		-63	6.6	GAACAAATTAAAAGCAGAAATACATTTGTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03507	-210	6	GAACTCTTATAAAAATTTAGATCATATGTTC
		-43	6.7	GAACATTATTAAATTTAAAAATCATTTGTTC
Photorhabdus luminescens subsp. laumondii TTO1	plu3143	-72	6.8	GAACAATTGTTTTTTAAATAGATAAATGTTC
Salmonella typhimurium LT2	STM4074	-233	6.5	GAACATTTCTAAATCATTAACACAATTGTTC
		-67	6.6	GAACAATTTCTTTTTCAAAAAACATTTGTTC
Yersinia pestis KIM	y3769	2	6.6	GAACACTTTTAAATTAAAAATATTTTTGTTC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of LsrR regulog to Escherichia coli HS

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --