Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlpR regulog to Escherichia coli HS

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli HS
Orthologous TF(s) EcHS_A3620
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Escherichia coli HS
Locus tag Position Score Sequence
Position: -155
Score: 5.3
Sequence: TGTTCGTTATCGAACA
Locus tag: EcHS_A3622
EcHS_A3622 -155 5.3 TGTTCGTTATCGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpE
Ortholog function: thiosulfate sulfurtransferase
Escherichia coli str. K-12 substr. MG1655 b3425 -155 5.3 TGTTCGTTATCGAACA
Salmonella typhimurium LT2 STM3525 -164 5.3 TGTTCGTTATCGAACA
Citrobacter koseri ATCC BAA-895 CKO_04844 -168 5.1 TGTTCGTTATCGAGCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03791 -167 4.9 TGCTCGATATCGCTCA
Erwinia amylovora ATCC 49946 EAM_3264 -203 4.7 TGTTCGTTTTCGAGCA
Position: -50
Score: 5.3
Sequence: TGTTCGATAACGAACA
Locus tag: EcHS_A3623
EcHS_A3623 -50 5.3 TGTTCGATAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA
Position: -96
Score: 5.2
Sequence: TGCTCGTTAACGATAA
Locus tag: EcHS_A4158
EcHS_A4158 -96 5.2 TGCTCGTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Escherichia coli str. K-12 substr. MG1655 b3927 -158 4.2 GGCGCGATAACGCTCA
-96 5.2 TGCTCGTTAACGATAA
Citrobacter koseri ATCC BAA-895 CKO_03071 -162 4.2 GGCGCGATAACGCTCA
-99 5.2 TGCTCGTTAACGATAA
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