Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GntR regulog to Escherichia coli HS

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli HS
Orthologous TF(s) EcHS_A3637
Regulated genes 4
Built upon 61 sites [see more]
Predicted regulatory interactions in Escherichia coli HS
Locus tag Position Score Sequence
Position: -212
Score: 6.3
Sequence: TTATTTTACCGGTAACATGA
Locus tag: EcHS_A1943
EcHS_A1943 -212 6.3 TTATTTTACCGGTAACATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: edd
Ortholog function: 6-phosphogluconate dehydratase (EC 4.2.1.12)
Escherichia coli str. K-12 substr. MG1655 b1851 -212 6.3 TTATTTTACCGGTAACATGA
Salmonella typhimurium LT2 STM1885 -212 6.1 GTATTTTACCGGTAACATGA
Citrobacter koseri ATCC BAA-895 CKO_01115 -211 6.3 TTATTTTACCGGTAACATGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02366 -211 6.3 TTATTTTACCGGTAACATGA
-2 5.4 CAATGTTACGGGTAACAAAT
Enterobacter sp. 638 Ent638_2420 -210 6.3 TTATTTTACCGGTAACATGA
Serratia proteamaculans 568 Spro_4499 -73 6.4 CAATGTTACCGATAACATGT
-59 5.5 ACATGTTACCGGTAACAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1836 -359 5.9 CATTGTTACCGGTATCATTT
Proteus mirabilis HI4320 PMI2760 -111 5.1 GCTTGTTACCCGTAACAATG
-96 6.4 CAATGTTACCGGTAACAAGT
Position: -61
Score: 6.4
Sequence: CAATGTTACCGATAACAGTT
Locus tag: EcHS_A3636
EcHS_A3636 -61 6.4 CAATGTTACCGATAACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Escherichia coli str. K-12 substr. MG1655 b3437 -61 6.4 CAATGTTACCGATAACAGTT
-48 5.8 AACAGTTACCCGTAACATTT
Position: -117
Score: 3.8
Sequence: TCACGTTATGCGTAACATAG
Locus tag: EcHS_A4523
EcHS_A4523 -117 3.8 TCACGTTATGCGTAACATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnD
Ortholog function: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Escherichia coli str. K-12 substr. MG1655 b4267 -146 3.8 TAtTtcTACtGaTAAgAaTT
-116 3.8 TcAcGTTAtgcGTAACATag
Salmonella typhimurium LT2 STM4484 -116 4.3 TcAcGTTAtgcGTAACATTg
Serratia proteamaculans 568 Spro_3287 -120 4.2 TcAcGTTAaaGGTAACAgcT
Position: -119
Score: 5
Sequence: CTATGTTACGCATAACGTGA
Locus tag: EcHS_A4524
EcHS_A4524 -119 5 CTATGTTACGCATAACGTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Escherichia coli str. K-12 substr. MG1655 b4268 -119 5 CTATGTTACGCATAACGTGA
Salmonella typhimurium LT2 STM4485 -119 5.1 CAATGTTACGCATAACGTGA
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