Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AgaR regulog to Pectobacterium wasabiae WPP163

Reference regulog properties
Source regulog: AgaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pectobacterium wasabiae WPP163
Orthologous TF(s) Pecwa_2385
Regulated genes 3
Built upon 19 sites [see more]
Predicted regulatory interactions in Pectobacterium wasabiae WPP163
Locus tag Position Score Sequence
Position: -213
Score: 5.7
Sequence: CTTTCGATTTATTTC
Locus tag: Pecwa_2385
Pecwa_2385 -213 5.7 CTTTCGATTTATTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaR
Ortholog function: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Escherichia coli str. K-12 substr. MG1655 b3131 -34 -1.1 GAAATGAAACGAAAG
Citrobacter koseri ATCC BAA-895 CKO_04529 -35 -1.1 GAAATGAAACGAAAG
Enterobacter sp. 638 Ent638_3571 -35 -1.1 GAAATGAAACGAAAG
Position: -115
Score: 5.7
Sequence: CTTTCATTTTCTTTC
Locus tag: Pecwa_2392
Pecwa_2392 -115 5.7 CTTTCATTTTCTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaS
Ortholog function: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Escherichia coli str. K-12 substr. MG1655 b3136 -150 5.6 ATTTCGTTTTATTTC
-119 5.1 CTTTCAGTTTCTTTT
Citrobacter koseri ATCC BAA-895 CKO_04536 -252 5.3 CTTTCTTTTTCTTTC
-150 5.7 TTTTCGTTTTATTTC
-119 5.4 CTTTCGATTTCTTTT
Enterobacter sp. 638 Ent638_3577 -144 5.7 TTTTCGTTTTATTTC
-113 4.6 CTTTCACTTTCCTTT