Propagation of UxuR regulog to Pectobacterium wasabiae WPP163
| Source regulog: | UxuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pectobacterium wasabiae WPP163 |
| Orthologous TF(s) | Pecwa_3324 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -98
Score: 4.5 Sequence: TAAGTGGTATAACAAATC
Locus tag: Pecwa_0744
|
||||
| Pecwa_0744 | -98 | 4.5 | TAAGTGGTATAACAAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: exu regulon transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 4.7 | AAAGTGGTATAACAAATA |
| Yersinia pestis KIM | y3602 | -105 | 4.5 | TAAGTGGTATAACAAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 4.5 | TAAGTGGTATAACAAATC |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 4.2 | AAAGTGGTATAACAACTC |
|
Position: -162
Score: 5.9 Sequence: AATTTGGTAAACCAATTT
Locus tag: Pecwa_2627
|
||||
| Pecwa_2627 | -162 | 5.9 | AATTTGGTAAACCAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaT | ||||
| Ortholog function: Putative MFS superfamily hexuronate transporter | ||||
| Yersinia pestis KIM | y3232 | -217 | 5.2 | ATTTTGGTGAACCAATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1967 | -162 | 5.9 | AATTTGGTAAACCAATTT |
|
Position: -176
Score: 6 Sequence: AAATTGGTTTACCAAATT
Locus tag: Pecwa_2628
|
||||
| Pecwa_2628 | -176 | 6 | AAATTGGTTTACCAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: periplasmic binding protein/LacI transcriptional regulator | ||||
| Yersinia pestis KIM | y3231 | -194 | 5.4 | ATATTGGTTCACCAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -176 | 6 | AAATTGGTTTACCAAATT |
|
Position: -126
Score: 5.2 Sequence: TAATTGGTCAATCAATTT
Locus tag: Pecwa_3323
|
||||
| Pecwa_3323 | -126 | 5.2 | TAATTGGTCAATCAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4322 | -180 | 5.4 | GATGTGGTTAACCAATTT |
| Salmonella typhimurium LT2 | STM3135 | -336 | 5.6 | AAATTGGTTGACCAATCA |
| -149 | 5.2 | GATTTGGTTAGCCAATTT | ||
| Yersinia pestis KIM | y2902 | -510 | 4.5 | AAgTTGtTagACCAgTTT |
| -352 | 4 | AAATTGGTaAgtCcAaTa | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1093 | -109 | 5.2 | TAATTGGTCAATCAATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0170 | -77 | 5.7 | TTTTTGGTTGACCAATTT |