Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LeuO regulog to Escherichia coli E24377A

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Escherichia coli E24377A
Orthologous TF(s) EcE24377A_0078
Regulated genes 3
Built upon 21 sites [see more]
Predicted regulatory interactions in Escherichia coli E24377A
Locus tag Position Score Sequence
Position: -325
Score: 4.1
Sequence: ATTAATGTTAAGAAT
Position: -297
Score: 3.5
Sequence: ATATAAATTAATTAT
Position: -243
Score: 4.9
Sequence: ATTCGCGGTAGTTAT
Position: -97
Score: 3.5
Sequence: TTTCTTATTTTATAT
Position: -68
Score: 3.8
Sequence: ATTCTTCAGGATTAT
Locus tag: EcE24377A_0078
EcE24377A_0078 -325 4.1 ATTAATGTTAAGAAT
-297 3.5 ATATAAATTAATTAT
-243 4.9 ATTCGCGGTAGTTAT
-97 3.5 TTTCTTATTTTATAT
-68 3.8 ATTCTTCAGGATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuO
Ortholog function: Dual transcriptional regulator LeuO, LysR family
Citrobacter koseri ATCC BAA-895 CKO_03302 -241 3.5 ATTCGCCACGCTTAT
Edwardsiella tarda EIB202 ETAE_0623 -246 4.7 ATTGCCCTTAATTAT
Enterobacter sp. 638 Ent638_0623 -229 4.6 ATTCATTGGATTTAT
Escherichia coli str. K-12 substr. MG1655 b0076 -325 4.1 ATTAATGTTAAGAAT
-243 4.9 ATTCGCGGTAGTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00081 -291 4.2 ATTTTTATGGATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3672 -223 4.2 ATTGGAATTATATAT
-112 4.7 ATTGATCTCGTTAAT
Proteus mirabilis HI4320 PMI2082 -289 3.8 ATTTTGTTTTATTAT
Salmonella typhimurium LT2 STM0115 -263 3.9 ATTCACTTGGTGTAT
-240 4.4 ATTCGCCATAGTTAT
Serratia proteamaculans 568 Spro_0746 -400 3.6 ATTCTTGATATCAAT
Yersinia pestis KIM y3642 -413 4.2 ATTATTGGTGATTAT
-210 5 ATTGGCGTTATTAAT
Position: -290
Score: 4.4
Sequence: ATTGATTTTAAATAT
Locus tag: EcE24377A_0536
EcE24377A_0536 -290 4.4 ATTGATTTTAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhsD
Ortholog function: component of rhs element
Escherichia coli str. K-12 substr. MG1655 b0497 -323 4.2 ATTGCTGATATTAAT
-291 4.4 ATTGATTTTAAATAT
Position: -167
Score: 4.7
Sequence: ATTTATATTTTTTAT
Locus tag: EcE24377A_3063
EcE24377A_3063 -167 4.7 ATTTATATTTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cas3
Ortholog function: CRISPR-associated helicase
Photorhabdus luminescens subsp. laumondii TTO1 plu0745 -242 4.4 ATTATCTTTATTTAT
Salmonella typhimurium LT2 STM2944 -165 4.2 ATTTATAATAATTAT
-152 4 ATTCGTGGGGTAAAT
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