Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: Fur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) GYMC10_2136
Regulated genes 11
Built upon 200 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -162
Score: 5.7
Sequence: TTTGAAAACCATTATCAAT
Position: -96
Score: 5.8
Sequence: TGTGAGAATGATTATCAAT
Position: -90
Score: 5.7
Sequence: AATGATTATCAATCTCATT
Locus tag: GYMC10_1133
GYMC10_1133 -162 5.7 TTTGAAAACCATTATCAAT
-96 5.8 TGTGAGAATGATTATCAAT
-90 5.7 AATGATTATCAATCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfiZ
Ortholog function: Iron(III) siderophore transport permease
Paenibacillus sp. JDR-2 Pjdr2_4366 -170 5 GATGATAATATTTCTCACT
-111 5.2 TTTGATAACGATTCTCATA
Position: 30
Score: 4.4
Sequence: AATGAACATGAATTTCTGT
Locus tag: GYMC10_2059
GYMC10_2059 30 4.4 AATGAACATGAATTTCTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasE
Ortholog function: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Bacillus subtilis subsp. subtilis str. 168 BSU03290 -33 5 AATGACAAAAACTATCATT
Bacillus cereus ATCC 14579 BC2135 -112 4.4 TTTGTGAATCATTATAAAA
Bacillus halodurans C-125 BH0614 -62 4.1 ACTAATTATAATAATCAGA
Position: -72
Score: 6.3
Sequence: AATGATAATCGTTATCATT
Locus tag: GYMC10_2490
GYMC10_2490 -72 6.3 AATGATAATCGTTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yetG
Ortholog function: Putative monooxygenase
Bacillus amyloliquefaciens FZB42 RBAM_007300 -47 5.8 TTTGAGAATCATTTTCATT
Bacillus cereus ATCC 14579 BC2969 -65 5.9 ATTGAAAATAATTATCATA
-59 4.8 AATAATTATCATAATCAAC
Bacillus halodurans C-125 BH3883 -54 6 TTTGATAATGATAATCAAT
-48 6 AATGATAATCAATATCAAA
Bacillus clausii KSM-K16 ABC1946 -52 6 AATGAGAATCGTTATCAAT
Position: -58
Score: 6.1
Sequence: ATTGATAATGATTATCACA
Locus tag: GYMC10_3214
GYMC10_3214 -58 6.1 ATTGATAATGATTATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgT
Ortholog function: Thioredoxin reductase (EC 1.8.1.9)
Paenibacillus sp. JDR-2 Pjdr2_3247 -57 6.1 ATTGATAATGATTATCACA
Position: -83
Score: 6.1
Sequence: ATTGATAATCAATCTCAAT
Locus tag: GYMC10_4303
GYMC10_4303 -83 6.1 ATTGATAATCAATCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclN
Ortholog function: Iron compound ABC uptake transporter permease protein
Bacillus subtilis subsp. subtilis str. 168 BSU03800 -98 6.4 AATGATAATGATAATCAAT
-92 4.9 AATGATAATCAATTACTAT
Bacillus amyloliquefaciens FZB42 RBAM_004050 -87 5.9 GTTGATAATGATAATCATT
Bacillus pumilus SAFR-032 BPUM_0984 -57 6.4 ATTGATAATGATAATCATT
Bacillus licheniformis DSM 13 BLi00463 -46 6.4 ATTGATAATGATaATCAtT
Bacillus cereus ATCC 14579 BC5105 -107 6.5 AATGAAAATGATTATCAAT
Bacillus halodurans C-125 BH1025 -71 6.1 AATGATAATGCTTATCATT
-49 6.2 ACTGATAATGATTATCACT
Bacillus clausii KSM-K16 ABC2895 -129 4.5 AGCGAGATTCTTTCTCATT
-68 6.2 ATTGATAATGAGTATCATT
Oceanobacillus iheyensis HTE831 OB0539 -61 5.2 CTTAATAATGATAATCATT
-55 6.5 AATGATAATCATTTTCAAT
Position: -74
Score: 5.3
Sequence: CATGATAATGAAATTCATT
Position: -68
Score: 5.8
Sequence: AATGAAATTCATTCTCATT
Locus tag: GYMC10_5013
GYMC10_5013 -74 5.3 CATGATAATGAAATTCATT
-68 5.8 AATGAAATTCATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuB
Ortholog function: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Bacillus subtilis subsp. subtilis str. 168 BSU33310 -65 5.3 AAAGAGAATCATTATCATC
Bacillus amyloliquefaciens FZB42 RBAM_030430 -185 5.5 AAAGAGAATCATTATCAGT
-49 6.7 ATTGATAATCATTATCATT
Bacillus pumilus SAFR-032 BPUM_2992 -234 6 TATGATAATGATTCTCAAT
-58 6.7 ATTGATAATCATTATCATT
Bacillus licheniformis DSM 13 BLi03521 -46 5.5 AATGATAATCGTTATCGGT
Bacillus halodurans C-125 BH1083 -51 6.5 AGTGATAATGATTATCAAT
Position: -61
Score: 6.7
Sequence: AATGATAATCATTATCAAT
Locus tag: GYMC10_5249
GYMC10_5249 -61 6.7 AATGATAATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feuA
Ortholog function: Fe3+-bacillibactin ABC transporter substrate-binding protein
Bacillus clausii KSM-K16 ABC3487 -49 5.8 AGTGATAATCGTTCTCATT
Position: -36
Score: 6
Sequence: AATGATAACCATTCTCATT
Locus tag: GYMC10_5250
GYMC10_5250 -36 6 AATGATAACCATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: btr
Ortholog function: Transcriptional regulator of Fe-bacillibactin uptake, AraC family
Bacillus subtilis subsp. subtilis str. 168 BSU01640 -47 6.5 ATTGAAAATGATTATCAAT
Bacillus amyloliquefaciens FZB42 RBAM_002130 -50 5.6 AATGATAACAGTTATCATT
Bacillus pumilus SAFR-032 BPUM_3700 -196 5.6 TTTGATATTGATAATCATT
-190 6.3 ATTGATAATCATTTTCACT
Bacillus clausii KSM-K16 ABC3488 -37 6.7 ATTGATAATGATTATCAAT