Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) GYMC10_1916
Regulated genes 20
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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© 2009-2020 RegPrecise
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -40
Score: 4.8
Sequence: ATGAAAGGGTTTACAA
Locus tag: GYMC10_0521
GYMC10_0521 -40 4.8 ATGAAAGGGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: abnB
Ortholog function: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)
Bacillus amyloliquefaciens FZB42 RBAM_036390 -45 4.9 TTGAAAGCGTTTTAAG
Bacillus clausii KSM-K16 ABC3369 -61 4.7 TTGAAAGCGGTGCCAA
Bacillus halodurans C-125 BH1878 -40 4.2 TTGTAAGGGTTTTCAC
Bacillus licheniformis DSM 13 BLi04220 -30 5.2 ATGAAAGCGTTTTAAA
Bacillus subtilis subsp. subtilis str. 168 BSU39330 -46 5 ATGTAAGCGTTTAAAA
Position: -44
Score: 4.5
Sequence: GTGAAAGCGTATTAAT
Locus tag: GYMC10_1358
GYMC10_1358 -44 4.5 GTGAAAGCGTATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: melA
Ortholog function: Alpha-galactosidase (EC 3.2.1.22)
Bacillus amyloliquefaciens FZB42 RBAM_027220 -91 4.8 TTGAAAACGCTTACTC
Bacillus clausii KSM-K16 ABC0732 -100 4.5 ATGAAAGCGCAATATT
Bacillus licheniformis DSM 13 BLi01143 -51 4.9 ATGAAAGCGCTTTTTA
Bacillus pumilus SAFR-032 BPUM_1750 -78 4.4 TTGAAAGCGCTTTACC
Bacillus subtilis subsp. subtilis str. 168 BSU30300 -86 4.8 TTGTAACCGCTTACTT
Position: -60
Score: 4.5
Sequence: ATGTAACCGGTTGCAA
Locus tag: GYMC10_1382
GYMC10_1382 -60 4.5 ATGTAACCGGTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsB
Ortholog function: ABC-type sugar transport system, periplasmic component
Bacillus halodurans C-125 BH3448 -19 4.6 TTGAAAGGGGTTTCAT
Bacillus licheniformis DSM 13 BLi00439 -41 4.7 TTGTAAACGCTGTCTT
Paenibacillus sp. JDR-2 Pjdr2_0664 -35 4.7 ATGAAAGCGGTTTTTT
Position: -51
Score: 4.8
Sequence: ATTAAAGCGGTTTCAT
Position: -8
Score: 4.6
Sequence: TTGTAAACGTGTTCAA
Locus tag: GYMC10_1477
GYMC10_1477 -51 4.8 ATTAAAGCGGTTTCAT
-8 4.6 TTGTAAACGTGTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3680
Ortholog function: Predicted beta-xyloside ABC transporter, substrate-binding component
Bacillus halodurans C-125 BH3680 6 4.9 AGGAAAACGCTTACAA
Oceanobacillus iheyensis HTE831 OB3123 9 4.7 AAGAAAGCGTTTACAG
Paenibacillus sp. JDR-2 Pjdr2_0728 -8 4.6 TTGTAAACGTGTTCAA
Position: 6
Score: 4.7
Sequence: TTGAAACCGCATTCTT
Locus tag: GYMC10_1638
GYMC10_1638 6 4.7 TTGAAACCGCATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Bacillus amyloliquefaciens FZB42 RBAM_025860 -32 4.4 ATGCAAGCGCTTTATT
Bacillus clausii KSM-K16 ABC0408 -136 4.9 TTGGAAGCGCTTTAAT
Bacillus licheniformis DSM 13 BLi03028 -65 5 TTGTAAGCGTTTTAAT
Bacillus pumilus SAFR-032 BPUM_2327 -35 5 TTGAAACCGCTATCAA
Bacillus subtilis subsp. subtilis str. 168 BSU28800 -38 5 TTGAAAGCGTTTTATT
Oceanobacillus iheyensis HTE831 OB2797 -59 4.3 AAGAAAGCGTATCCTT
-29 4.4 ATGTAGGCGTTTTCAG
Position: -90
Score: 5
Sequence: ATGAAAGCGCTTTATT
Locus tag: GYMC10_1645
GYMC10_1645 -90 5 ATGAAAGCGCTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araN
Ortholog function: Alpha-arabinosides ABC transport system, substrate-binding protein
Bacillus amyloliquefaciens FZB42 RBAM_025810 -32 4.4 ATGCAAGCGCTTTATT
Bacillus halodurans C-125 BH0905 -113 5 ATGTAAACGTTAACAA
Bacillus licheniformis DSM 13 BLi03024 -65 5 TTGTAAGCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168 BSU28750 -38 5 TTGAAAGCGTTTTATT
Position: -247
Score: 4.5
Sequence: TGGACAGCGCTTACAA
Locus tag: GYMC10_1918
GYMC10_1918 -247 4.5 TGGACAGCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Anoxybacillus flavithermus WK1 Aflv_0461 -70 4.7 ATGAAAACGATTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_026810 -72 4.9 TTGAAAACGCTTTATA
Bacillus licheniformis DSM 13 BLi03120 -69 4.9 ATGAAAACGCTTAATA
Bacillus pumilus SAFR-032 BPUM_2617 -74 4.4 GTGAAACCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168 BSU29690 -75 4.9 TTGAAAACGCTTTATA
Position: -55
Score: 4.6
Sequence: TTGTAAGCGCTGTCCA
Locus tag: GYMC10_1919
GYMC10_1919 -55 4.6 TTGTAAGCGCTGTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1 Aflv_0462 237 4.9 ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_026800 -102 4.5 TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16 ABC2760 -65 4.7 TTGAAAACGTTACCTT
0 4.8 ATGAAAGCGCTTCCTG
Bacillus halodurans C-125 BH3234 6 4.4 TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13 BLi03119 6 4.7 TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032 BPUM_2616 -30 4.7 TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU29680 -101 4.5 TATAAAGCGTTTTCAA
6 4.8 TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831 OB0022 -36 4.5 TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2 Pjdr2_3796 -56 5 TTGAAAGCGTATTCTT
Position: -125
Score: 5.1
Sequence: ATGAAAACGCATACAA
Locus tag: GYMC10_2821
GYMC10_2821 -125 5.1 ATGAAAACGCATACAA
Supported by regulated orthologs from reference regulons