Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Pectobacterium carotovorum subsp. carotovorum PC1

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pectobacterium carotovorum subsp. carotovorum PC1
Orthologous TF(s) PC1_1206
Regulated genes 51
Built upon 656 sites [see more]
Predicted regulatory interactions in Pectobacterium carotovorum subsp. carotovorum PC1
Locus tag Position Score Sequence
Position: -139
Score: 5
Sequence: CATATTGATAATAATTATC
Position: -133
Score: 5.5
Sequence: GATAATAATTATCATTACC
Position: -110
Score: 4
Sequence: GATAATTAATGTTATTCGC
Locus tag: PC1_0329
PC1_0329 -139 5 CATATTGATAATAATTATC
-133 5.5 GATAATAATTATCATTACC
-110 4 GATAATTAATGTTATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuR
Ortholog function: TonB-dependent outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03087 -133 4 GATAATACCTATCATTACC
Erwinia amylovora ATCC 49946 EAM_1726 -140 4.2 TTTGTTGATAATGATTATC
-134 5.1 GATAATGATTATCATTTGT
Position: -136
Score: 4.4
Sequence: AATAATGAGAACGACTATC
Locus tag: PC1_0345
PC1_0345 -136 4.4 AATAATGAGAACGACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -296
Score: 5
Sequence: GATTATTAAAATCATTATC
Position: -290
Score: 4.9
Sequence: TAAAATCATTATCATTTAT
Locus tag: PC1_0461
PC1_0461 -296 5 GATTATTAAAATCATTATC
-290 4.9 TAAAATCATTATCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA0476
Ortholog function: putative iron MFS transporter
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0476 -106 4.8 GATAATGAAAATAGTTATC
-100 4.4 GAAAATAGTTATCATTCAT
Position: -262
Score: 4.8
Sequence: ATTAATGATAAGTATTTTC
Position: -256
Score: 4.8
Sequence: GATAAGTATTTTCATTATC
Position: -54
Score: 4.9
Sequence: GATAATGATTTTAATAATC
Locus tag: PC1_0462
PC1_0462 -262 4.8 ATTAATGATAAGTATTTTC
-256 4.8 GATAAGTATTTTCATTATC
-54 4.9 GATAATGATTTTAATAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: entC
Ortholog function: isochorismate synthetase, siderophore biosynthesis
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0477 -60 4.4 ATGAATGATAATGATTTTA
-54 4.8 GATAATGATTTTAATAATC
Position: -89
Score: 5.2
Sequence: GATATTAGTTATCATTATC
Locus tag: PC1_0616
PC1_0616 -89 5.2 GATATTAGTTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -43
Score: 4.7
Sequence: GATAATGAAAATCATTTCA
Locus tag: PC1_0688
PC1_0688 -43 4.7 GATAATGAAAATCATTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecI
Ortholog function: RNA polymerase sigma-70 factor FecI
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0813 -49 4.4 ATTAATGATAATGAAAATC
-43 4.5 GATAATGAAAATCATTTCA
Position: -64
Score: 4.6
Sequence: GCACTTGATAATCATTATC
Position: -58
Score: 4.7
Sequence: GATAATCATTATCGTTTCT
Locus tag: PC1_0731
PC1_0731 -64 4.6 GCACTTGATAATCATTATC
-58 4.7 GATAATCATTATCGTTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -175
Score: 4.3
Sequence: GGTAATAGTTTTCATTTGT
Position: -157
Score: 4.6
Sequence: TAAAACGATTATCATTTGT
Position: -151
Score: 4.3
Sequence: GATTATCATTTGTATTATT
Locus tag: PC1_0759
PC1_0759 -175 4.3 GGTAATAGTTTTCATTTGT
-157 4.6 TAAAACGATTATCATTTGT
-151 4.3 GATTATCATTTGTATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA0877
Ortholog function: TonB-like protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0877 -269 4.4 TAAAACGATTATCATTTGT
-263 4.1 GATTATCATTTGTATTATT
Position: -51
Score: 4.2
Sequence: AAAAATAATTTTATTTTTC
Locus tag: PC1_0760
PC1_0760 -51 4.2 AAAAATAATTTTATTTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yddB
Ortholog function: TonB-dependent receptor
Escherichia coli str. K-12 substr. MG1655 b1495 -4 4.4 GCTAATGATAACCATTCCC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0878 -269 4.4 TAAAACGATTATCATTTGT
-263 4.1 GATTATCATTTGTATTATT
Proteus mirabilis HI4320 PMI3706 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
Position: -266
Score: 4.7
Sequence: TGTAATGAAAACCATTATC
Position: -260
Score: 4.3
Sequence: GAAAACCATTATCATATTA
Locus tag: PC1_0974
PC1_0974 -266 4.7 TGTAATGAAAACCATTATC
-260 4.3 GAAAACCATTATCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecB
Ortholog function: iron(III) dicitrate-binding periplasmic protein
Escherichia coli str. K-12 substr. MG1655 b4290 -63 4.7 TGTAATGATAACCATTCTC
-57 4.1 GATAACCATTCTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_03834 -95 4.2 GATAACGAAAAAAATTATC
-89 4.5 GAAAAAAATTATCATTTTT
-83 4.1 AATTATCATTTTTATTGTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1076 -216 4.2 GATAACGAAAAAAATTATC
-210 4.4 GAAAAAAATTATCATTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4447 -88 4.5 GTAAAAAATTATCATTTTC
Position: -50
Score: 4.9
Sequence: GAAAATGACAATGATTATC
Position: -44
Score: 4.3
Sequence: GACAATGATTATCTTTCCC
Locus tag: PC1_1127
PC1_1127 -50 4.9 GAAAATGACAATGATTATC
-44 4.3 GACAATGATTATCTTTCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_1015
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y3342 -41 4.2 ACAAACGATTTTGATTATC
-35 4.6 GATTTTGATTATCATTCGC
Serratia proteamaculans 568 Spro_1015 -52 4.3 GCTAATGAGAGTGATTATC
Position: -102
Score: 3.9
Sequence: GAAAACAAGAGTGATTATC
Position: -96
Score: 4
Sequence: AAGAGTGATTATCATATAT
Locus tag: PC1_1346
PC1_1346 -102 3.9 GAAAACAAGAGTGATTATC
-96 4 AAGAGTGATTATCATATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_2768
Ortholog function: iron(III) ABC transporter, periplasmic binding protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1470 -96 3.9 AAGAGTGATTATCATATAT
Edwardsiella tarda EIB202 ETAE_2768 -82 4.5 AAAAGTAATTATCATTTAC
Position: -41
Score: 4.9
Sequence: GATAATAAGAATAAATATC
Position: -35
Score: 4.5
Sequence: AAGAATAAATATCATTTGT
Locus tag: PC1_1385
PC1_1385 -41 4.9 GATAATAAGAATAAATATC
-35 4.5 AAGAATAAATATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895 CKO_02057 -98 5.3 TATAATGATAATAATTATC
-92 5 GATAATAATTATCATTTGT
Yersinia pestis KIM y2370 -47 4.1 GTTAATGTTAATAAATCTC
-41 4.5 GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1510 -41 4.7 GATAATAAGAATAAATATC
-35 4.2 AAGAATAAATATCATTTGT
Position: -104
Score: 5.3
Sequence: GGTAATGATTTTTATTATC
Position: -98
Score: 5
Sequence: GATTTTTATTATCATTTTC
Locus tag: PC1_1411
PC1_1411 -104 5.3 GGTAATGATTTTTATTATC
-98 5 GATTTTTATTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hasR
Ortholog function: TonB-dependent heme receptor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1538 -102 5 GGTAATGATTTTTATTATC
-96 4.8 GATTTTTATTATCATTTTC
-90 4.1 TATTATCATTTTCATTAAG
Position: -151
Score: 5.2
Sequence: GATAATAATTATCAATTAC
Locus tag: PC1_1413
PC1_1413 -151 5.2 GATAATAATTATCAATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA1540
Ortholog function: ECF sigma-24 factor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1540 -88 4.1 ATATGTGATAATAATTATC
-82 5 GATAATAATTATCAATTAC
Position: -124
Score: 4.4
Sequence: GCAAACGATTATCATTTAA
Locus tag: PC1_1436
PC1_1436 -124 4.4 GCAAACGATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_00905 -74 4.6 AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895 CKO_01243 -74 4.6 AGAAATAGTTATCATTTTC
Yersinia pestis KIM y2404 -74 4.6 AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320 PMI2596 -64 4.2 GCAAATGATATTAATTCGC
-58 4.4 GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu2316 -160 5.1 ATTAATGAGAATCATTATC
-154 4.6 GAGAATCATTATCAATAGT
Position: -267
Score: 4.4
Sequence: TCAAATAATAACTATTTTC
Locus tag: PC1_1585
PC1_1585 -267 4.4 TCAAATAATAACTATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: DNA protection ferritin-like protein
Salmonella typhimurium LT2 STM0831 -188 4.4 TAAAATGAGAATTATTACC
-136 4 TTTAATCAAAATAAATATT
Citrobacter koseri ATCC BAA-895 CKO_02310 -188 4.5 GTGAATGAGAATTATTAAC
-137 4.3 TTTAATCATTTTCAATATT
Enterobacter sp. 638 Ent638_1299 -118 4.1 TAACATTATTATCACTATT
Position: -80
Score: 4.6
Sequence: GCTAATACTTATCATTTAC
Locus tag: PC1_1659
PC1_1659 -80 4.6 GCTAATACTTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cfrA
Ortholog function: TonB-dependent outer membrane receptor
Citrobacter koseri ATCC BAA-895 CKO_01134 -4 4.8 TGTAATGATAATTATTTTT
2 5 GATAATTATTTTTATTATC
8 4.5 TATTTTTATTATCATTTTC
Yersinia pestis KIM y0850 -103 4.6 AGTAATGATAATTGATATC
-97 4.4 GATAATTGATATCATTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2722 -100 4.6 GCAAATGATTTTAATTTTC
-94 4.3 GATTTTAATTTTCATTTAC
Position: -71
Score: 4.3
Sequence: GCGAATGATAATTAAATTC
Locus tag: PC1_1763
PC1_1763 -71 4.3 GCGAATGATAATTAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM y4043 -26 4.8 GGTAATAAAAATCATTAGC
-20 4.2 AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2564 -86 4.2 GCGAATGATAATTAAATTC
-80 4.1 GATAATTAAATTCTTTATT
Proteus mirabilis HI4320 PMI2957 -121 4.1 GTGAATTAGTATCATTACT
Position: -284
Score: 3.9
Sequence: GTGGATGTTTATTATTCTC
Position: -278
Score: 4
Sequence: GTTTATTATTCTCATTACG
Position: -261
Score: 3.7
Sequence: CGAAATGGGAATCGTTTTT
Position: -204
Score: 3.4
Sequence: ATTTTTGATAATAAAAATG
Position: -198
Score: 4.6
Sequence: GATAATAAAAATGATTCGC
Position: -192
Score: 4.2
Sequence: AAAAATGATTCGCAATAAT
Position: -158
Score: 4.1
Sequence: TTAAGTGATAATGAATATC
Position: -152
Score: 4.5
Sequence: GATAATGAATATCACTTAA
Locus tag: PC1_1838
PC1_1838 -284 3.9 GTGGATGTTTATTATTCTC
-278 4 GTTTATTATTCTCATTACG
-261 3.7 CGAAATGGGAATCGTTTTT
-204 3.4 ATTTTTGATAATAAAAATG
-198 4.6 GATAATAAAAATGATTCGC
-192 4.2 AAAAATGATTCGCAATAAT
-158 4.1 TTAAGTGATAATGAATATC
-152 4.5 GATAATGAATATCACTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -53
Score: 5.3
Sequence: GATATTGATAATTATTCTC
Locus tag: PC1_1919
PC1_1919 -53 5.3 GATATTGATAATTATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -73
Score: 4.9
Sequence: TCAAATGATAATAATTATC
Position: -67
Score: 4.9
Sequence: GATAATAATTATCATTTCG
Locus tag: PC1_2266
PC1_2266 -73 4.9 TCAAATGATAATAATTATC
-67 4.9 GATAATAATTATCATTTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuB
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Serratia proteamaculans 568 Spro_2919 -65 4.5 GCAAACAATTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2023 -72 4.4 CGAAATGATAATAGTTATC
Proteus mirabilis HI4320 PMI1437 -66 4.6 AATAGTGATAATGACTATC
-60 5 GATAATGACTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2040 -97 5 TTTAATGATAATAATTATC
-91 5.5 GATAATAATTATCATTTTC
Position: -37
Score: 5.2
Sequence: GATAATGATTATCATTTGA
Locus tag: PC1_2451
PC1_2451 -37 5.2 GATAATGATTATCATTTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -59
Score: 4.9
Sequence: GAAAATGATTCTCATTCAT
Locus tag: PC1_2459
PC1_2459 -59 4.9 GAAAATGATTCTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemS
Ortholog function: hemin transport protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03088 -133 4 GATAATACCTATCATTACC
Enterobacter sp. 638 Ent638_1740 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Erwinia amylovora ATCC 49946 EAM_1642 -65 4.2 TTTGTTGATAATGATTATC
-59 4.8 GATAATGATTATCATTCCA
Yersinia pestis KIM y0542 -48 3.7 GATAATGCTTATCACACTG
-30 4.1 GATAGTCGTTATCATTAAG
Serratia proteamaculans 568 Spro_2168 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1846 -59 4.7 GAAAATGATTCTCATTCAT
Edwardsiella tarda EIB202 ETAE_1798 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1427 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2633 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -75
Score: 4.9
Sequence: GAAAATAATAATCACTTGC
Locus tag: PC1_2471
PC1_2471 -75 4.9 GAAAATAATAATCACTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA1830
Ortholog function: Cupin 2 domain protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1830 -81 4.3 GTAAATGAAAATAATAATC
-75 4.7 GAAAATAATAATCACTTGC
Position: -49
Score: 4.8
Sequence: AAAAATAATTATCATTTAA
Locus tag: PC1_2750
PC1_2750 -49 4.8 AAAAATAATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895 CKO_02656 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Yersinia pestis KIM y0547 -54 4.1 TCGAATGCTTATGATTATC
-48 4.4 GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3009 -55 4.2 CCAAATAAAAATAATTATC
-49 4.6 AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202 ETAE_1793 -59 4.4 TCGAATGATAACTATTATC
-53 4.4 GATAACTATTATCATTCAA
Position: -36
Score: 5
Sequence: GTAAATGAGAATCATTAAC
Locus tag: PC1_2751
PC1_2751 -36 5 GTAAATGAGAATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02654
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_02654 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Position: -249
Score: 4.9
Sequence: GAGAATAAATATCATTTTT
Locus tag: PC1_2847
PC1_2847 -249 4.9 GAGAATAAATATCATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA3096
Ortholog function: ABC iron transporter, periplasmic-binding protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3096 -249 4.6 GAGAATAAATATCATTTTT
Position: -164
Score: 4.9
Sequence: AATAATAACTATCATTATT
Locus tag: PC1_2919
PC1_2919 -164 4.9 AATAATAACTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y1526 -108 4.8 AACAATGATAATCATTTTT
-102 4.7 GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3137 -169 4.2 CGAAATAATAATAACTATC
-163 4.7 AATAATAACTATCATTATT
-157 4.4 AACTATCATTATTATTATC
Position: -60
Score: 4.2
Sequence: TTATACGATAATAATTATC
Position: -54
Score: 4.9
Sequence: GATAATAATTATCAAACTC
Locus tag: PC1_3035
PC1_3035 -60 4.2 TTATACGATAATAATTATC
-54 4.9 GATAATAATTATCAAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00520 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0573 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2096 -48 4.5 AAGAATGATAATATTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3241 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Position: -51
Score: 5.3
Sequence: AATAATGATAACTATTATC
Locus tag: PC1_3040
PC1_3040 -51 5.3 AATAATGATAACTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_2941
Ortholog function: Fe3+-hydroxamate ABC transporter, periplasmic component
Erwinia amylovora ATCC 49946 EAM_2941 -41 4.1 GAAACTGATAATAATAATC
-35 5.5 GATAATAATAATCATTTTC
-29 4.1 AATAATCATTTTCTTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3246 -51 5 AATAATGATAACTATTATC
Position: -58
Score: 4.4
Sequence: CTTTATCGTAATCATTATC
Position: -52
Score: 4.6
Sequence: CGTAATCATTATCGTTCTC
Locus tag: PC1_3109
PC1_3109 -58 4.4 CTTTATCGTAATCATTATC
-52 4.6 CGTAATCATTATCGTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuC
Ortholog function: iron-hydroxamate transporter ATP-binding subunit
Escherichia coli str. K-12 substr. MG1655 b0151 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0192 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03217 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00166 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0691 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Yersinia pestis KIM y0796 -157 4.4 CGTTTTAATAATCATTATC
-151 4.7 AATAATCATTATCGTTACC
Serratia proteamaculans 568 Spro_3978 -60 4.7 GCTTATAATAATTATTATC
-54 4.7 AATAATTATTATCGTTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3312 -123 4.3 CTTTATCGTAATCATTATC
-117 4.5 CGTAATCATTATCGTTCTC
Position: -50
Score: 4.2
Sequence: AAAAACGGTAATAATTCTT
Position: -44
Score: 4.8
Sequence: GGTAATAATTCTTATTTAC
Locus tag: PC1_3773
PC1_3773 -50 4.2 AAAAACGGTAATAATTCTT
-44 4.8 GGTAATAATTCTTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -126
Score: 4.4
Sequence: AAAAATAATTCCTATTTAC
Locus tag: PC1_3826
PC1_3826 -126 4.4 AAAAATAATTCCTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Escherichia coli str. K-12 substr. MG1655 b3337 -51 3.9 tgaAATaAgAActATTtTC
-45 3.9 aAgAActATttTCATTtat
Salmonella typhimurium LT2 STM3444 -55 4.6 TGTAATCATAACCATTCTC
-49 4.3 CATAACCATTCTCATTTAC
Citrobacter koseri ATCC BAA-895 CKO_04744 -55 4.3 TGTAATCATAACTATTCTC
-49 4.2 CATAACTATTCTCATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03723 -55 4.6 TGTAATCATAACCATTCTC
-49 3.9 cATAAccATtcTCATTtaa
Enterobacter sp. 638 Ent638_3755 -55 4.7 TGTAATCATAATTATTCTC
-49 4.2 CATAATTATTCTCACTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4034 -132 3.9 tgaAATaAaAATaATTcTt
-126 4.4 AAAAATAATTCTTATTTAC
Proteus mirabilis HI4320 PMI3252 -57 4.2 TGAAATAACAATGATTATC
-51 4.8 AACAATGATTATCATTTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4729 -59 4.4 TGAAATGAGACTCATTATT
-53 3.6 GAgAcTcATtATtATTtaa
Position: -181
Score: 4.4
Sequence: AAGAATGATACCTATTTAC
Locus tag: PC1_3906
PC1_3906 -181 4.4 AAGAATGATACCTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4116
Ortholog function: siderophore biosynthesis protein, IucA / IucC family
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4116 -181 4.2 AAGAATGATACCTATTTAC
Proteus mirabilis HI4320 PMI0232 -158 4.4 GAGAATGAGATTGATTATT
-152 4.7 GAGATTGATTATTATTTAC
Position: -88
Score: 4.3
Sequence: GTAAATAGGTATCATTCTT
Locus tag: PC1_3907
PC1_3907 -88 4.3 GTAAATAGGTATCATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4117
Ortholog function: citrate lyase beta chain
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4117 -88 4.1 GTAAATAGGTATCATTCTT
Proteus mirabilis HI4320 PMI0231 -80 4.7 GTAAATAATAATCAATCTC
-74 4.6 AATAATCAATCTCATTCTC
Position: -105
Score: 5.1
Sequence: AATAATCATTTTCAATATC
Locus tag: PC1_4160
PC1_4160 -105 5.1 AATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -105
Score: 4.4
Sequence: AATGGTGATAATGATTATC
Position: -99
Score: 5.1
Sequence: GATAATGATTATCGTTAGT
Locus tag: PC1_4183
PC1_4183 -105 4.4 AATGGTGATAATGATTATC
-99 5.1 GATAATGATTATCGTTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00978
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Citrobacter koseri ATCC BAA-895 CKO_00978 -90 4.3 GATAAGGTTTCTCATTATC
Serratia proteamaculans 568 Spro_0924 -93 4.3 AATAATATTTATTGTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0065 -106 4.3 AATGGTGATAATGATTATC
-100 4.9 GATAATGATTATCGTTAGT
Position: -50
Score: 4.8
Sequence: AAGAACGATTATCATTCTT
Locus tag: PC1_4194
PC1_4194 -50 4.8 AAGAACGATTATCATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecI
Ortholog function: ECF-family RNA polymerase sigma factor fecI
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0057 -56 4.1 ATAAATAAGAACGATTATC
-50 4.6 AAGAACGATTATCATTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1235 -62 5.3 GAAAATAATAATCATTTTC
-56 4.6 AATAATCATTTTCATTTAT
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