Propagation of LeuO regulog to Citrobacter rodentium ICC168
| Source regulog: | LeuO - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | |
| Effector: | Guanosine 3',5'-bis(diphosphate) |
| Phylum: | Gammaproteobacteria |
| Propagated regulon: | |
| Target genome | Citrobacter rodentium ICC168 |
| Orthologous TF(s) | ROD_00831 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -264
Score: 3.4 Sequence: ATTCATAAAATGTAT
Position: -241
Score: 4.5 Sequence: ATTTGTCCTGGTTAT
Position: -163
Score: 3.5 Sequence: TCTGGTGTTTTTTAT
Position: -150
Score: 3.8 Sequence: ATTGGTATTTTGTTT
Position: -96
Score: 3.5 Sequence: TTTCTTATTTTATAT
Position: -67
Score: 3.4 Sequence: ATTTTCTGAGATTAT
Locus tag: ROD_00831
|
||||
| ROD_00831 | -264 | 3.4 | ATTCATAAAATGTAT | |
| -241 | 4.5 | ATTTGTCCTGGTTAT | ||
| -163 | 3.5 | TCTGGTGTTTTTTAT | ||
| -150 | 3.8 | ATTGGTATTTTGTTT | ||
| -96 | 3.5 | TTTCTTATTTTATAT | ||
| -67 | 3.4 | ATTTTCTGAGATTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: leuO | ||||
| Ortholog function: Dual transcriptional regulator LeuO, LysR family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03302 | -241 | 3.5 | ATTCGCCACGCTTAT |
| Edwardsiella tarda EIB202 | ETAE_0623 | -246 | 4.7 | ATTGCCCTTAATTAT |
| Enterobacter sp. 638 | Ent638_0623 | -229 | 4.6 | ATTCATTGGATTTAT |
| Escherichia coli str. K-12 substr. MG1655 | b0076 | -325 | 4.1 | ATTAATGTTAAGAAT |
| -243 | 4.9 | ATTCGCGGTAGTTAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00081 | -291 | 4.2 | ATTTTTATGGATTAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3672 | -223 | 4.2 | ATTGGAATTATATAT |
| -112 | 4.7 | ATTGATCTCGTTAAT | ||
| Proteus mirabilis HI4320 | PMI2082 | -289 | 3.8 | ATTTTGTTTTATTAT |
| Salmonella typhimurium LT2 | STM0115 | -263 | 3.9 | ATTCACTTGGTGTAT |
| -240 | 4.4 | ATTCGCCATAGTTAT | ||
| Serratia proteamaculans 568 | Spro_0746 | -400 | 3.6 | ATTCTTGATATCAAT |
| Yersinia pestis KIM | y3642 | -413 | 4.2 | ATTATTGGTGATTAT |
| -210 | 5 | ATTGGCGTTATTAAT | ||
|
Position: -31
Score: 4.2 Sequence: ATTCATATCAGAAAT
Locus tag: ROD_30451
|
||||
| ROD_30451 | -31 | 4.2 | ATTCATATCAGAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cas3 | ||||
| Ortholog function: CRISPR-associated helicase | ||||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0745 | -242 | 4.4 | ATTATCTTTATTTAT |
| Salmonella typhimurium LT2 | STM2944 | -165 | 4.2 | ATTTATAATAATTAT |
| -152 | 4 | ATTCGTGGGGTAAAT | ||