Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Citrobacter rodentium ICC168

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Citrobacter rodentium ICC168
Orthologous TF(s) ROD_18311
Regulated genes 10
Built upon 130 sites [see more]
Predicted regulatory interactions in Citrobacter rodentium ICC168
Locus tag Position Score Sequence
Position: -39
Score: 4.5
Sequence: AAGTGGTCAGACCTCCT
Locus tag: ROD_02221
ROD_02221 -39 4.5 AAGTGGTCAGACCTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadE
Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Escherichia coli str. K-12 substr. MG1655 b0221 -38 4.5 AAGTGGTCAGACCTCCT
Salmonella typhimurium LT2 STM0309 -39 4.5 AAGTGGTCAGACCTCCT
Citrobacter ko Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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