Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CueR regulog to Citrobacter rodentium ICC168

Reference regulog properties
Source regulog: CueR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator (repressor)
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Citrobacter rodentium ICC168
Orthologous TF(s) ROD_05421, ROD_45291
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Citrobacter rodentium ICC168
Locus tag Position Score Sequence
Position: -74
Score: 6.7
Sequence: ACCTTCCCGTAAGGGGAGGGT
Locus tag: ROD_01341
ROD_01341 -74 6.7 ACCTTCCCGTAAGGGGAGGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cueO
Ortholog function: Multicopper oxidase
Escherichia coli str. K-12 substr. MG1655 b0123 -73 6.4 ACCTTCCCGTAAGGGGAAGGA
Salmonella typhimurium LT2 STM0168 -62 6.5 ACCTTCCCGTTAGGGCAGGGT
Citrobacter koseri ATCC BAA-895 CKO_03244 -73 6.7 ACCTTCCCGTAAGGGGAGGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00131 -62 6.4 ACCTTCCCGTTACGGTAGGGT
Erwinia amylovora ATCC 49946 EAM_0777 -62 6.2 ACCTTCCCGCTGGGGCAGGGT
Yersinia pestis KIM y0777 -210 6.4 ACCTTCCCCTAAGAGGAGGGT
Serratia proteamaculans 568 Spro_3999 -118 6.3 ACCTTCCGCTAAGGGGAGGGT
Proteus mirabilis HI4320 PMI0159 -108 5.6 ACCTTCCAGTAAGGGGAGACT
Position: -95
Score: 6.2
Sequence: ACCTTCCCCTTGATGGAAGGT
Locus tag: ROD_05411
ROD_05411 -95 6.2 ACCTTCCCCTTGATGGAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA
Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4)
Citrobacter koseri ATCC BAA-895 CKO_02665 -67 6.2 ACCTTCCCCTTGATGGAAGGT
Position: -34
Score: 5.9
Sequence: ACCTTCCATCAAGGGGAAGGT
Locus tag: ROD_05421
ROD_05421 -34 5.9 ACCTTCCATCAAGGGGAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cueR
Ortholog function: Copper-responsive transcriptional regulator, MerR family
Salmonella typhimurium LT2 STM0499 -33 5.4 ACCTTCCAGCAAGGTTAAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00465 -33 6.2 ACCTTCCAGCAAGGGGAAGGT
Enterobacter sp. 638 Ent638_0963 -33 5.4 ACCTTCCAGCAAGGTTAAGGT
Erwinia amylovora ATCC 49946 EAM_1045 -33 5.4 ACCTTCCATCAAGGGGAACGT
Yersinia pestis KIM y1094 -33 5.6 ACCTTCCAGCAAGGTGAAGGT
Serratia proteamaculans 568 Spro_1151 -33 6.2 ACCTTCCAGCAAGGGGAAGGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1194 -33 5.6 ACCTTCTAGCAAGGGGAGGGT
Edwardsiella tarda EIB202 ETAE_1040 -33 5.7 ACCTTCCCGCAAGGTTAAGGT
Proteus mirabilis HI4320 PMI2172 -33 6.2 ACCTTTCCGCAAGGGGAAGGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3823 -33 6 ACCTTCCCTCAAGGGTAAGGT
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