Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraC regulog to Escherichia coli str. K-12 substr. DH10B

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Escherichia coli str. K-12 substr. DH10B
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 56 sites [see more]
Predicted regulatory interactions in Escherichia coli str. K-12 substr. DH10B
Locus tag Position Score Sequence
Position: -188
Score: 7.8
Sequence: GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Locus tag: ECDH10B_4422
ECDH10B_4422 -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytfQ
Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Citrobacter koseri ATCC BAA-895 CKO_03603 -189 7.5 TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
Enterobacter sp. 638 Ent638_0412 -189 7.3 TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Escherichia coli str. K-12 substr. MG1655 b4227 -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04622 -324 7.4 TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA