Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LeuO regulog to Escherichia coli str. K-12 substr. DH10B

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Escherichia coli str. K-12 substr. DH10B
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 21 sites [see more]
Predicted regulatory interactions in Escherichia coli str. K-12 substr. DH10B
Locus tag Position Score Sequence
Position: -291
Score: 4.4
Sequence: ATTGATTTTAAATAT
Locus tag: ECDH10B_0454
ECDH10B_0454 -291 4.4 ATTGATTTTAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhsD
Ortholog function: component of rhs element
Escherichia coli str. K-12 substr. MG1655 b0497 -323 4.2 ATTGCTGATATTAAT
-291 4.4 ATTGATTTTAAATAT
Position: -298
Score: 4.3
Sequence: ATTCACAGTATGAAT
Position: -268
Score: 4.9
Sequence: ATTCATGGTAATTAT
Locus tag: ECDH10B_2928
ECDH10B_2928 -298 4.3 ATTCACAGTATGAAT
-268 4.9 ATTCATGGTAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: casA
Ortholog function: CRISPR-associated protein CasA
Escherichia coli str. K-12 substr. MG1655 b2760 -298 4.3 ATTCACAGTATGAAT
-268 4.9 ATTCATGGTAATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0746 -242 4.4 ATTATCTTTATTTAT
Salmonella typhimurium LT2 STM2943 -165 4.2 ATTTATAATAATTAT
-152 4 ATTCGTGGGGTAAAT