Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of UxuR regulog to Escherichia coli str. K-12 substr. DH10B

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli str. K-12 substr. DH10B
Orthologous TF(s) No orthologous TFs found
Regulated genes 4
Built upon 44 sites [see more]
Predicted regulatory interactions in Escherichia coli str. K-12 substr. DH10B
Locus tag Position Score Sequence
Position: -62
Score: 4.8
Sequence: GAATTGGTTAACTAATCA
Locus tag: ECDH10B_1750
ECDH10B_1750 -62 4.8 GAATTGGTTAACTAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uidA
Ortholog function: beta-D-glucuronidase
Escherichia coli str. K-12 substr. MG1655 b1617 -62 4.8 GAATTGGTTAACTAATCA
-42 4.6 TTAAAGGTTGACCAGTAT
Position: -129
Score: 5.8
Sequence: CTATTGGTTAACCAATTT
Locus tag: ECDH10B_1751
ECDH10B_1751 -129 5.8 CTATTGGTTAACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uidR
Ortholog function: hexuronide repressor, TetR family
Escherichia coli str. K-12 substr. MG1655 b1618 -129 5.8 CTATTGGTTAACCAATTT
Position: -176
Score: 4.1
Sequence: AATTTATTATACCAATCT
Locus tag: ECDH10B_2330
ECDH10B_2330 -176 4.1 AATTTATTATACCAATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeiQ
Ortholog function: paralog of D-mannonate oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b2172 -176 4.1 AATTTATTATACCAATCT
Yersinia pestis KIM y2903 -363 4.3 AtgTTGtTatACCgATTT
-250 3.9 tAtTgGacTtACCAATTT
-92 4.2 AAAcTGGTctAaCAAcTT
Position: -47
Score: 4.7
Sequence: AAAGTGGTATAACAAATA
Locus tag: ECDH10B_3270
ECDH10B_3270 -47 4.7 AAAGTGGTATAACAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuR
Ortholog function: exu regulon transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3094 -47 4.7 AAAGTGGTATAACAAATA
Yersinia pestis KIM y3602 -105 4.5 TAAGTGGTATAACAAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0643 -98 4.5 TAAGTGGTATAACAAATC
Edwardsiella tarda EIB202 ETAE_0434 -68 4.2 AAAGTGGTATAACAACTC
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