Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraC regulog to Dickeya zeae Ech1591

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Dickeya zeae Ech1591
Orthologous TF(s) Dd1591_2146
Regulated genes 4
Built upon 56 sites [see more]
Predicted regulatory interactions in Dickeya zeae Ech1591
Locus tag Position Score Sequence
Position: -220
Score: 7.3
Sequence: CGGCTATTTTATCCATA-(4)-CAGCGAATACGCCCTGA
Locus tag: Dd1591_0970
Dd1591_0970 -220 7.3 CGGCTATTTTATCCATA-(4)-CAGCGAATACGCCCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytfQ
Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Citrobacter koseri ATCC BAA-895 CKO_03603 -189 7.5 TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
Enterobacter sp. 638 Ent638_0412 -189 7.3 TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Escherichia coli str. K-12 substr. MG1655 b4227 -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04622 -324 7.4 TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA
Position: -177
Score: 7.7
Sequence: CAGCTGATTTGTACATA-(4)-CAGCAAATTTAACCAGC
Locus tag: Dd1591_2150
Dd1591_2150 -177 7.7 CAGCTGATTTGTACATA-(4)-CAGCAAATTTAACCAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Erwinia amylovora ATCC 49946 EAM_1697 -174 8.3 CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT
-99 6.3 CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2274 -176 7.1 TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT
-101 6.4 CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
Serratia proteamaculans 568 Spro_2244 -175 7.5 CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG
-100 7.1 AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Yersinia pestis KIM y2095 -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
-114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
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