Propagation of AraC regulog to Dickeya zeae Ech1591
| Source regulog: | AraC - Enterobacterales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Dickeya zeae Ech1591 |
| Orthologous TF(s) | Dd1591_2146 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -220
Score: 7.3 Sequence: CGGCTATTTTATCCATA-(4)-CAGCGAATACGCCCTGA
Locus tag: Dd1591_0970
|
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| Dd1591_0970 | -220 | 7.3 | CGGCTATTTTATCCATA-(4)-CAGCGAATACGCCCTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytfQ | ||||
| Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03603 | -189 | 7.5 | TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA |
| Enterobacter sp. 638 | Ent638_0412 | -189 | 7.3 | TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG |
| Escherichia coli str. K-12 substr. MG1655 | b4227 | -188 | 7.8 | GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04622 | -324 | 7.4 | TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA |
|
Position: -177
Score: 7.7 Sequence: CAGCTGATTTGTACATA-(4)-CAGCAAATTTAACCAGC
Locus tag: Dd1591_2150
|
||||
| Dd1591_2150 | -177 | 7.7 | CAGCTGATTTGTACATA-(4)-CAGCAAATTTAACCAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: Ribulokinase (EC 2.7.1.16) | ||||
| Erwinia amylovora ATCC 49946 | EAM_1697 | -174 | 8.3 | CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT |
| -99 | 6.3 | CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2274 | -176 | 7.1 | TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT |
| -101 | 6.4 | CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA | ||
| Serratia proteamaculans 568 | Spro_2244 | -175 | 7.5 | CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG |
| -100 | 7.1 | AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA | ||
| Yersinia pestis KIM | y2095 | -189 | 7.8 | CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG |
| -114 | 7.5 | AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA | ||