Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ExuR regulog to Dickeya zeae Ech1591

Reference regulog properties
Source regulog: ExuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Galacturonate utilization
Effector: Galacturonate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya zeae Ech1591
Orthologous TF(s) Dd1591_3513
Regulated genes 3
Built upon 48 sites [see more]
Predicted regulatory interactions in Dickeya zeae Ech1591
Locus tag Position Score Sequence
Position: -67
Score: 5.4
Sequence: TAATTGGTGTGATATCTTT
Locus tag: Dd1591_3511
Dd1591_3511 -67 5.4 TAATTGGTGTGATATCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaC
Ortholog function: Uronate isomerase (EC 5.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b3092 -71 6.2 AAATTGGTGTGATAACTTT
Citrobacter koseri ATCC BAA-895 CKO_04494 -8 6.2 AAATTGGTGTGATAACTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03520 -90 6.2 AAATTGGTGTGATAACTTT
Enterobacter sp. 638 Ent638_3546 -70 6.2 AAATTGGTGTGATAACTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0645 -67 5.4 TAATTGGTGTGATATCTTT
Position: -282
Score: 6.3
Sequence: AAATTGGTATGACAAATTA
Locus tag: Dd1591_3512
Dd1591_3512 -282 6.3 AAATTGGTATGACAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT
Ortholog function: Hexuronate transporter
Escherichia coli str. K-12 substr. MG1655 b3093 -129 6.2 AAAGTTGTATGACAAGTTA
Citrobacter koseri ATCC BAA-895 CKO_04495 -227 5.7 GAAGTTGTATGACAAGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03521 -240 6.2 AAAGTTGTATGACAAGTTA
Enterobacter sp. 638 Ent638_3547 -116 6.2 AAAGTTGTATGACAAGTTA
Yersinia pestis KIM y3601 -515 5.6 AAAtctGTATGACAAgTTa
Serratia proteamaculans 568 Spro_4322 -157 5.6 AAATCTGTATGACAAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0644 -185 6.2 AAAGTTGTATGACAAATTA
Edwardsiella tarda EIB202 ETAE_0435 -282 5.2 GAATCTGTATGACAAGTTA