Propagation of NarP regulog to Dickeya zeae Ech1591
| Source regulog: | NarP - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrate; Nitrite |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Dickeya zeae Ech1591 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -82
Score: 3.8 Sequence: TAATCCTTTTTGGGGA
Locus tag: Dd1591_0782
|
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| Dd1591_0782 | -82 | 3.8 | TAATCCTTTTTGGGGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnrN | ||||
| Ortholog function: Nitric oxide-dependent regulator DnrN | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4209 | -79 | 3.7 | TGCTACGTAAGGGTTA |
| Salmonella typhimurium LT2 | STM4399 | -78 | 3.9 | CACCCCGAAAGAGTTA |
| Citrobacter koseri ATCC BAA-895 | CKO_03623 | -78 | 3.9 | TGACCCGAAAGGGTTA |
| Yersinia pestis KIM | y0652 | -108 | 4.4 | TACCCACTTGGAGTTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3606 | -81 | 4.8 | TACCTCGTAAGCGGTA |
|
Position: -231
Score: 4.8 Sequence: TAACTCTTTGGGGGTA
Locus tag: Dd1591_1849
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| Dd1591_1849 | -231 | 4.8 | TAACTCTTTGGGGGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narX | ||||
| Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1222 | -228 | 4 | TTACCCATAGTGAGTA |
| -118 | 3.8 | TAACTCTTTCCGGGTA | ||
| Salmonella typhimurium LT2 | STM1766 | -230 | 4.3 | TTACCCTTAATGAGTA |
| -120 | 4.5 | TAACTCGTTATAGGTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01297 | -249 | 4.4 | TGCCCCTTAGTGAGTA |
| -139 | 4.5 | TAACTCGTTATAGGTA | ||
| Serratia proteamaculans 568 | Spro_2899 | -138 | 4.7 | TACTTCGTTAGAGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2029 | -217 | 4.2 | CACTCCTTAATGAGTA |
| -106 | 4.7 | TACTCACTAGTGGGTA | ||
| Proteus mirabilis HI4320 | PMI3569 | -73 | 4.5 | TACTCCCTTTGGAGTA |
|
Position: -246
Score: 4.7 Sequence: TACCCCCAAAGAGTTA
Locus tag: Dd1591_1850
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| Dd1591_1850 | -246 | 4.7 | TACCCCCAAAGAGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narK | ||||
| Ortholog function: Nitrate/nitrite antiporter | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2030 | -246 | 4.8 | TACCCACTAGTGAGTA |
| -135 | 4.3 | TACTCATTAAGGAGTG | ||
|
Position: -170
Score: 4.7 Sequence: TACCTCTTTGGTGGTA
Position: -76
Score: 3.8 Sequence: TACGTCGTAGTGAGCA
Locus tag: Dd1591_1853
|
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| Dd1591_1853 | -170 | 4.7 | TACCTCTTTGGTGGTA | |
| -76 | 3.8 | TACGTCGTAGTGAGCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narG | ||||
| Ortholog function: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) | ||||
| Serratia proteamaculans 568 | Spro_2883 | -193 | 3.8 | TGATACTTTAGGGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2031 | -194 | 4.3 | TAATTCTTTAGTGGTA |
| Proteus mirabilis HI4320 | PMI3571 | -237 | 4.8 | TACTCCAAAGGGAGTA |
|
Position: -55
Score: 4.9 Sequence: TAACCCTTAGTGGGTA
Locus tag: Dd1591_2180
|
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| Dd1591_2180 | -55 | 4.9 | TAACCCTTAGTGGGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompW | ||||
| Ortholog function: Outer membrane protein W precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1256 | -55 | 4.5 | TACTCCAATGTAGGTA |
| Salmonella typhimurium LT2 | STM1732 | -55 | 4.7 | TACTTCATTGTGGGTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01333 | -55 | 4.5 | TACTCCATTGTAGGTA |
| Yersinia pestis KIM | y2044 | -43 | 4.7 | TACTCATTTGTAGGTA |
| Serratia proteamaculans 568 | Spro_2674 | -28 | 4.5 | TACCCGTAAGTAGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2303 | -56 | 4.9 | TACCTACTTAGGGGTA |
| Edwardsiella tarda EIB202 | ETAE_1528 | -52 | 3.7 | TCACTCAATATGGTTA |
| Proteus mirabilis HI4320 | PMI1350 | -59 | 4.9 | TACTTATTAATGGGTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2478 | -55 | 3.8 | TTCTAATATATGAGTA |
|
Position: -295
Score: 4.4 Sequence: TAACCATAATTGAGTA
Locus tag: Dd1591_2752
|
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| Dd1591_2752 | -295 | 4.4 | TAACCATAATTGAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeaR | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01824 | -234 | 3.7 | TAACCAATAAATGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1474 | -170 | 4.2 | TAACCACAATTGAGTA |
|
Position: -28
Score: 4.3 Sequence: TACCTCTGAAAAGGTA
Locus tag: Dd1591_4187
|
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| Dd1591_4187 | -28 | 4.3 | TACCTCTGAAAAGGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpI | ||||
| Ortholog function: ATP synthase maturation | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3739 | -31 | 4.6 | TACCTCGAAGGGAGCA |
| Salmonella typhimurium LT2 | STM3872 | -30 | 4.5 | TACCTCGAAGTGAGCA |
| Citrobacter koseri ATCC BAA-895 | CKO_00079 | -30 | 4.6 | TACCTCGAAGGGAGCA |
| Serratia proteamaculans 568 | Spro_0001 | -33 | 4.6 | TACCTCCTCAGGGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -33 | 4.3 | TACCTCTGAAAAGGTA |
| Edwardsiella tarda EIB202 | ETAE_3526 | -156 | 4.4 | TACCTCCTGGGGGGTA |