Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlpR regulog to Yersinia pseudotuberculosis PB1/+

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pseudotuberculosis PB1/+
Orthologous TF(s) YPTS_3975
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Yersinia pseudotuberculosis PB1/+
Locus tag Position Score Sequence
Position: -93
Score: 5
Sequence: CGCTCGTTAACGATAA
Locus tag: YPTS_0091
YPTS_0091 -93 5 CGCTCGTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Yersinia pestis KIM y0046 -155 4.1 TACGCGAAAACGCTCA
-93 5 CGCTCGTTAACGATAA
Serratia proteamaculans 568 Spro_4797 -137 5.1 TGTTCGTTAACGATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4266 -107 4.7 CGCTCATTAACGATAA
Edwardsiella tarda EIB202 ETAE_3441 -93 5 CGCTCGTTAACGATAA
Position: -90
Score: 4.3
Sequence: TGTTTCTTATCAATCA
Locus tag: YPTS_0224
YPTS_0224 -90 4.3 TGTTTCTTATCAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: anaerobic glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -70 5 TGCGCGAAATCAAACA
Salmonella typhimurium LT2 STM2284 -69 5 TGCGCGAAATCAAACA
Citrobacter koseri ATCC BAA-895 CKO_00536 -69 5 TGCGCGAAATCAAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -70 5.1 TGCTCGAAATCAAACA
Enterobacter sp. 638 Ent638_2805 -68 5 TGTTCGAAATCAAACA
Yersinia pestis KIM y0404 -90 4.3 TGTTTCTTATCAATCA
Serratia proteamaculans 568 Spro_0200 -73 4.7 TGTTCCTTATCAAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -83 4.7 TGCTCTTTATCAAACA
Edwardsiella tarda EIB202 ETAE_3115 -77 4.8 TGCTCCTTATCAAACA
Proteus mirabilis HI4320 PMI3592 -106 4.9 TGCTCATTATCAAACA
Position: -52
Score: 5
Sequence: TGAGCGAAAACGAACA
Locus tag: YPTS_3979
YPTS_3979 -52 5 TGAGCGAAAACGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA