Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NsrR regulog to Yersinia pseudotuberculosis PB1/+

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pseudotuberculosis PB1/+
Orthologous TF(s) YPTS_0460
Regulated genes 7
Built upon 73 sites [see more]
Predicted regulatory interactions in Yersinia pseudotuberculosis PB1/+
Locus tag Position Score Sequence
Position: -116
Score: 4.3
Sequence: GTTGTATCTTTAATATAAA
Position: -109
Score: 4.1
Sequence: CTTTAATATAAATTATAAG
Locus tag: YPTS_0581
YPTS_0581 -116 4.3 GTTGTATCTTTAATATAAA
-109 4.1 CTTTAATATAAATTATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufS
Ortholog function: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Escherichia coli str. K-12 substr. MG1655 b1680 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1373 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02137 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1764 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2618 -191 3.9 AATAAATTAAAGATATACC
Position: -38
Score: 5.2
Sequence: CACGCATTACAAATGCAAC
Locus tag: YPTS_1485
YPTS_1485 -38 5.2 CACGCATTACAAATGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Yersinia pestis KIM y2819 -90 4.7 ATTGCATTAAAAATACCTT
-38 5.3 CACGCATTACAAATACAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2662 -38 5.8 CAAGCATTTAAAATGCAAC
Edwardsiella tarda EIB202 ETAE_2215 -37 5.2 CAAGCATAATAAATGCAAC
Proteus mirabilis HI4320 PMI2112 -58 5.3 GTTGCATATTTAATGCAAC
Position: -44
Score: 5.9
Sequence: GTTGCATATAAAATGCATC
Locus tag: YPTS_1997
YPTS_1997 -44 5.9 GTTGCATATAAAATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehB
Ortholog function: Tellurite resistance protein TehB
Yersinia pestis KIM y2361 -44 5.9 GTTGCATATAAAATGCATC
Serratia proteamaculans 568 Spro_0987 -63 5.5 CATGTATTTTATATGCAAC
Position: -58
Score: 6.1
Sequence: GATGCATTTAAAATACATG
Locus tag: YPTS_2979
YPTS_2979 -58 6.1 GATGCATTTAAAATACATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Escherichia coli str. K-12 substr. MG1655 b2552 -47 5.7 GATGCATTTGAGATACATC
Salmonella typhimurium LT2 STM2556 -79 4.8 GATCCATTTACAATGCAAG
-47 5.8 GATGCATTTGATATACATC
Citrobacter koseri ATCC BAA-895 CKO_00235 -47 5.5 GATGTATTTGACATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02877 -47 6.3 GATGCATTTAAAATGCATC
Enterobacter sp. 638 Ent638_3037 -47 6.2 GATGCATATAAAATACATC
Yersinia pestis KIM y1321 -58 6.1 GATGCATTTAAAATACATG
Serratia proteamaculans 568 Spro_3639 -59 6 GATGCATTTAAAATGCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3251 -51 5.9 GATTCATATAAAATACAAC
Edwardsiella tarda EIB202 ETAE_2822 -45 6.2 GTTGCATTTAAAATACAAC
Proteus mirabilis HI4320 PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Photorhabdus luminescens subsp. laumondii TTO1 plu3292 -64 5.4 GTTGCATTTAAATTACATG
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