Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TnrA regulog to Bacillus cereus W

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus W
Orthologous TF(s) No orthologous TFs found
Regulated genes 22
Built upon 304 sites [see more]
Predicted regulatory interactions in Bacillus cereus W
Locus tag Position Score Sequence
Position: -159
Score: 3.8
Sequence: TTAAATTAATTATAACA
Locus tag: BcerW_010100001200
BcerW_010100001200 -159 3.8 TTAAATTAATTATAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_5900
Ortholog function: Asparaginase/glutaminase
Paenibacillus sp. JDR-2 Pjdr2_5900 -34 3.6 GGTTAGTAAACCTGACT
Position: -84
Score: 5.1
Sequence: TGTAAGAAAAGCTAACA
Locus tag: BcerW_010100011767
BcerW_010100011767 -84 5.1 TGTAAGAAAAGCTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -82 4.3 TGTTAAGAATCCTTACA
-59 5 TGACACATAATATAACA
Bacillus amyloliquefaciens FZB42 RBAM_017250 -82 4.3 TGTTAAGATTCCTTACA
-59 4.9 TGACACAAAATATAACA
Bacillus pumilus SAFR-032 BPUM_1636 -82 4.4 TGTTAATATTCCTAACA
-59 5.1 TGACATATAATATAACA
-54 4.2 TATAATATAACATGACA
Bacillus licheniformis DSM 13 BLi01992 -81 4.2 TGTAAAGAATCCTTACA
-58 5 TGACACATTATATAACA
Anoxybacillus flavithermus WK1 Aflv_1508 -82 4.7 TGTGATAAAATGTAACG
-59 4.3 TGACATATAAGTTAACA
Position: -8
Score: 3.6
Sequence: TGATAACAATGGTTACA
Locus tag: BcerW_010100015146
BcerW_010100015146 -8 3.6 TGATAACAATGGTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygaF
Ortholog function: Peroxiredoxin
Paenibacillus sp. JDR-2 Pjdr2_5899 -34 3.6 GGTTAGTAAACCTGACT
Position: -157
Score: 3.7
Sequence: TTTTAACTATAATGACA
Locus tag: BcerW_010100025960
BcerW_010100025960 -157 3.7 TTTTAACTATAATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclF
Ortholog function: Di-tripeptide-proton ABC symporter
Bacillus subtilis subsp. subtilis str. 168 BSU03670 -212 3.6 TCTAAAATTTTATTAAA
-175 4.9 TGTAAGAAAATCTCACG
Bacillus amyloliquefaciens FZB42 RBAM_003840 -211 3.4 CTTTAAATTTTATTAAA
-174 4.9 AGTCAGATAATATAACA
Bacillus pumilus SAFR-032 BPUM_0343 -183 3.8 TTAAATAAATTCTTTCA
-141 3.7 TGAAAGAATTTTTCATA
Bacillus licheniformis DSM 13 BLi00449 -180 3.9 TATTAAAAAATCTTTCA
Geobacillus kaustophilus HTA426 GK2020 -44 3.5 TGAATTATTATATTAAA
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