Propagation of GntR regulog to Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
| Source regulog: | GntR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 |
| Orthologous TF(s) | SPAB_04399 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -178
Score: 5.8 Sequence: ACATGTTACCCGTATCATTC
Locus tag: SPAB_04371
|
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| SPAB_04371 | -178 | 5.8 | ACATGTTACCCGTATCATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntT | ||||
| Ortholog function: High-affinity H+/gluconate symporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3415 | -178 | 5.9 | AGATGTTACCCGTATCATTC |
| -37 | 4.9 | TGACGTTACCCATAACAAAT | ||
| Salmonella typhimurium LT2 | STM3512 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.7 | TGACGTTACCCATAACAAAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04836 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.9 | CGACGTTACCCATAACAAAT | ||
|
Position: -61
Score: 6.4 Sequence: CAATGTTACCGATAACAGTT
Locus tag: SPAB_04398
|
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| SPAB_04398 | -61 | 6.4 | CAATGTTACCGATAACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntK | ||||
| Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12) | ||||
| Salmonella typhimurium LT2 | STM3542 | -61 | 6.4 | CAATGTTACCGATAACAGTT |
| -48 | 5.1 | AACAGTTACCCGTAACAAAT | ||
|
Position: -117
Score: 4.3 Sequence: TCACGTTATGCGTAACATTG
Locus tag: SPAB_05642
|
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| SPAB_05642 | -117 | 4.3 | TCACGTTATGCGTAACATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnD | ||||
| Ortholog function: L-idonate 5-dehydrogenase (EC 1.1.1.264) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4267 | -146 | 3.8 | TAtTtcTACtGaTAAgAaTT |
| -116 | 3.8 | TcAcGTTAtgcGTAACATag | ||
| Salmonella typhimurium LT2 | STM4484 | -116 | 4.3 | TcAcGTTAtgcGTAACATTg |
| Serratia proteamaculans 568 | Spro_3287 | -120 | 4.2 | TcAcGTTAaaGGTAACAgcT |
|
Position: -119
Score: 5.1 Sequence: CAATGTTACGCATAACGTGA
Locus tag: SPAB_05643
|
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| SPAB_05643 | -119 | 5.1 | CAATGTTACGCATAACGTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnK | ||||
| Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4268 | -119 | 5 | CTATGTTACGCATAACGTGA |
| Salmonella typhimurium LT2 | STM4485 | -119 | 5.1 | CAATGTTACGCATAACGTGA |