Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpN regulog to Bacillus cereus W

Reference regulog properties
Source regulog: CcpN - Bacillales
Regulator type: Transcription factor
Regulator family: CcpN
Regulation mode: repressor
Biological process: Gluconeogenesis
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus W
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacillus cereus W
Locus tag Position Score Sequence
Position: -68
Score: 4.8
Sequence: TTTTTGTGTTATACTATTATT
Position: -37
Score: 4.7
Sequence: ATAAATAGTATAACGCATTCA
Locus tag: BcerW_010100007105
BcerW_010100007105 -68 4.8 TTTTTGTGTTATACTATTATT
-37 4.7 ATAAATAGTATAACGCATTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapB
Ortholog function: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Bacillus subtilis subsp. subtilis str. 168 BSU29020 -67 5.5 TTAATGTGTTATACTAATTTT
Bacillus amyloliquefaciens FZB42 RBAM_026060 -68 5.1 TTAATGTGTTATACTATATAT
Bacillus pumilus SAFR-032 BPUM_2547 -69 4.4 CTAATGTGATATACTAATTTC
-38 5.1 TTATTGAGTATAACACATAAT
Bacillus licheniformis DSM 13 BLi03052 -68 5.4 ATAATGTGTTATACTTATTTT
Anoxybacillus flavithermus WK1 Aflv_0514 -70 5 TAAAAATGTTATACTATTTTT
-38 5.2 ATAAATAGTATAACACATATA
Geobacillus kaustophilus HTA426 GK2726 -69 4.8 AAAATATGATATACTATTTAT
-38 4.4 GAAAATAGTATAACATATATG
Bacillus cereus ATCC 14579 BC4583 -68 4.8 TTTTTGTGTTATACTATTATT
-37 4.7 ATAAATAGTATAACGCATTCA
Bacillus halodurans C-125 BH3149 -66 4.8 TAAAAGTGATATACTATTTAT
Bacillus clausii KSM-K16 ABC2705 -71 4.7 TATTTATGTTATACTATTTCA
Oceanobacillus iheyensis HTE831 OB2160 -66 5.2 AATTTGTGTTATACTAATTAT
-36 4.4 GTTATGAGTATATCATAATTA
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