Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Buchnera aphidicola str. APS (Acyrthosiphon pisum)

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Buchnera aphidicola str. APS (Acyrthosiphon pisum)
Orthologous TF(s) No orthologous TFs found
Regulated genes 44
Built upon 2301 sites [see more]
Predicted regulatory interactions in Buchnera aphidicola str. APS (Acyrthosiphon pisum)
Locus tag Position Score Sequence
Position: -32
Score: 4.4
Sequence: TATTGTGATTTTTTTAAAAACT
Locus tag: BU003
BU003 -32 4.4 TATTGTGATTTTTTTAAAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpE
Ortholog function: ATP synthase subunit C
Escherichia coli str. K-12 substr. MG1655 b3737 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3870 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00077 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04142 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4127 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3479 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4140 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0003 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4517 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3528 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3059 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0045 -265 5.7 TTATGTGATTTAAATCACATTT
Position: -341
Score: 3.4
Sequence: TACTGTTATTTTTTAAAAAAAA
Position: -333
Score: 3.6
Sequence: TTTTTTAAAAAAAATAACAATT
Position: -299
Score: 3.4
Sequence: AACTGCGATTTTCATACCGTAT
Position: -277
Score: 3.8
Sequence: TTTTTTGATGATTTTTAGATAT
Position: -259
Score: 3.3
Sequence: ATATATTATATATTTAAATTTT
Position: -220
Score: 3.4
Sequence: AAATCTGATTCTTTTTTTATAT
Position: -180
Score: 3.2
Sequence: ATGTTTAATTAATATAGAATTT
Position: -141
Score: 3.2
Sequence: ATTTTTTCTTTTTATATCAAAT
Position: -139
Score: 3.2
Sequence: TTTTTCTTTTTATATCAAATAA
Position: -39
Score: 3.2
Sequence: AATTATTAATTTTTACATATAA
Locus tag: BU032
BU032 -341 3.4 TACTGTTATTTTTTAAAAAAAA
-333 3.6 TTTTTTAAAAAAAATAACAATT
-299 3.4 AACTGCGATTTTCATACCGTAT
-277 3.8 TTTTTTGATGATTTTTAGATAT
-259 3.3 ATATATTATATATTTAAATTTT
-220 3.4 AAATCTGATTCTTTTTTTATAT
-180 3.2 ATGTTTAATTAATATAGAATTT
-141 3.2 ATTTTTTCTTTTTATATCAAAT
-139 3.2 TTTTTCTTTTTATATCAAATAA
-39 3.2 AATTATTAATTTTTACATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA
Position: -92
Score: 3.8
Sequence: ATATTTTATATTATTAAAATAT
Locus tag: BU047
BU047 -92 3.8 ATATTTTATATTATTAAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -90
Score: 3.4
Sequence: ATATTTTAATAATATAAAATAT
Locus tag: BU048
BU048 -90 3.4 ATATTTTAATAATATAAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Salmonella typhimurium LT2 STM4121 -44 3.5 AATTATGAATAAAAATACATTA
Citrobacter koseri ATCC BAA-895 CKO_03036 -110 4 ATTTGTGAATAAAAATACATTA
Enterobacter sp. 638 Ent638_4028 -44 3.8 AAATGTGAATAAAAATACACTA
Yersinia pestis KIM y0310 -43 3.7 TTTATTGACATAAATAAAAATA
Serratia proteamaculans 568 Spro_4781 -167 4 TATTGTGAATAAAAATACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -159 3.5 TATTTTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3237 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -41
Score: 3.6
Sequence: ATATATTATAAAAATAACGTAA
Position: 9
Score: 4.1
Sequence: TTTTCTGATTTTTTTAACAGTA
Locus tag: BU063
BU063 -41 3.6 ATATATTATAAAAATAACGTAA
9 4.1 TTTTCTGATTTTTTTAACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: crr
Ortholog function: PTS system, glucose-specific IIA component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b2417 -209 3.9 TTTTATGATTTGGTTCAATTCT
Salmonella typhimurium LT2 STM2433 -209 4.4 TTTTATGATTTGGTTCAAATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02764 -206 4 TTTTATGATTTGGTTCAAGTCT
Enterobacter sp. 638 Ent638_2945 -271 4.4 TTTTGTGGTCCACTTCAAACTT
-144 4 TTTTATGATTTGGTTCAAGTCT
Serratia proteamaculans 568 Spro_3450 -149 3.6 TTTTTTGATCTGAAGTGCCAAA
Proteus mirabilis HI4320 PMI1830 -275 4.4 TTTTGTGGTAGAGATCAAACTT
-115 3.6 TAACGTAACATGGCTTATATTA
Position: -102
Score: 3.6
Sequence: ATATATTATTCAGTTTATATAA
Locus tag: BU093
BU093 -102 3.6 ATATATTATTCAGTTTATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: talA
Ortholog function: Transaldolase (EC 2.2.1.2)
Escherichia coli str. K-12 substr. MG1655 b2464 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2473 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02798 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2959 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -64
Score: 3.6
Sequence: TTTTGTGATTGTTATGAAACCT
Locus tag: BU124
BU124 -64 3.6 TTTTGTGATTGTTATGAAACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -120
Score: 3.6
Sequence: TCTTGTGAATGCTTTAATAATT
Position: -102
Score: 3.6
Sequence: AATTGTACTATAATTTATAAAA
Locus tag: BU189
BU189 -120 3.6 TCTTGTGAATGCTTTAATAATT
-102 3.6 AATTGTACTATAATTTATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Escherichia coli str. K-12 substr. MG1655 b3908 -161 3.8 GTGGGTGATTTGCTTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_03093 -150 4.4 ACGGGTGATTTGGCTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -150 4 TTAGTTGTTCTACATCACAAAA
Enterobacter sp. 638 Ent638_4063 -160 3.6 CCGCGTGAGCAGACTCACAATT
Proteus mirabilis HI4320 PMI3036 -292 3.7 TTTTGCGCATAAGATCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -297 3.7 TTTTGCGCGGAAGATCACGCAA
Position: -4
Score: 3.9
Sequence: AAATATGAAATTATTAAAATTT
Locus tag: BU194
BU194 -4 3.9 AAATATGAAATTATTAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b0002 -83 3.8 TTTATTGACTTAGGTCACTAAA
Salmonella typhimurium LT2 STM0002 -103 4.2 GAATGTGATCAATTTAAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03385 -249 4.1 GAATGTGATCAAATTAAAAATT
Enterobacter sp. 638 Ent638_0564 -252 4.4 AATTGTGATCAAATTAGAAATT
Proteus mirabilis HI4320 PMI0001 -232 3.9 AAATTTGACATCTCTCTCGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0563 -223 4.2 ATGTTTGACTTTGCGCACAAAT
Position: -154
Score: 3.6
Sequence: ATTAGTGCAATAGTTAAAAAAA
Position: -39
Score: 3.6
Sequence: TCATATCATTTAATTCACACTA
Locus tag: BU195
BU195 -154 3.6 ATTAGTGCAATAGTTAAAAAAA
-39 3.6 TCATATCATTTAATTCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpt
Ortholog function: hypoxanthine phosphoribosyltransferase
Escherichia coli str. K-12 substr. MG1655 b0125 -147 5.3 ATGTGTGATCGTCATCACAATT
Salmonella typhimurium LT2 STM0170 -147 5.3 ATGTGTGATCGTCATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03242 -135 5.3 AAGTGTGATCGTCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00133 -134 5.4 AAGTGTGATCGGAATCACAAAT
Enterobacter sp. 638 Ent638_0673 -180 3.6 AATTTTGATAGCAATTAATTAT
-148 5.4 AAGTGTGATCGGAATCACAAAT
Proteus mirabilis HI4320 PMI0160 -154 3.6 TACTGTAATAAGTAACAAAATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0860 -144 4 AATTCTGATATGCTTTGCAAAA
Position: -202
Score: 3.1
Sequence: CATTTTAAAATCAATAAAATTA
Position: -136
Score: 3.6
Sequence: GTTTATGATTTTTTTAAAAAAA
Position: -117
Score: 3.9
Sequence: AAATATAAGAGCATTCACAATA
Position: -94
Score: 3.1
Sequence: AATTTTTTTAAAGTTAAAAAAT
Position: 15
Score: 3.4
Sequence: TATAATGACGTGGATCCAATTG
Locus tag: BU205
BU205 -202 3.1 CATTTTAAAATCAATAAAATTA
-136 3.6 GTTTATGATTTTTTTAAAAAAA
-117 3.9 AAATATAAGAGCATTCACAATA
-94 3.1 AATTTTTTTAAAGTTAAAAAAT
15 3.4 TATAATGACGTGGATCCAATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -4
Score: 3.6
Sequence: AATTATGATAATAGAAACAAAT
Locus tag: BU320
BU320 -4 3.6 AATTATGATAATAGAAACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b1852 -208 3.9 TAACATGATCAGTGTCAGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02367 -225 3.8 TTACATGATCAGGGTCGTATTT
Yersinia pestis KIM y2244 -231 4.1 TAATATGACCTGTGTCTAATTT
Proteus mirabilis HI4320 PMI1157 -225 3.7 AAGTATGACCTGTGTCTAACTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2122 -234 4.2 TAATTTAATGTTTTTCATAAAA
Position: -146
Score: 3.4
Sequence: AATTTTTTTATATATAAAAAAT
Position: -144
Score: 3.5
Sequence: TTTTTTTATATATAAAAAATAT
Locus tag: BU408
BU408 -146 3.4 AATTTTTTTATATATAAAAAAT
-144 3.5 TTTTTTTATATATAAAAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metK
Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6)
Escherichia coli str. K-12 substr. MG1655 b2942 -200 3.6 GAATGAGACACGATTCAAAAAA
Salmonella typhimurium LT2 STM3090 -200 3.9 CATTGCGACGGCCTTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04317 -199 3.5 CAACGAGAGTTGATTCAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03375 -199 4.3 AAATGCGACCGCCATCAAAAAA
Enterobacter sp. 638 Ent638_3346 -199 4.4 TAATGCGAGCGATATCAAAAAA
Proteus mirabilis HI4320 PMI2095 -275 3.5 CACTGTGATTCAGTTTTCACAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3683 -205 3.3 GTTTATACTCGCAATCACATAA
Position: -318
Score: 3.7
Sequence: AATTTTAATTAAATTCTAATAA
Locus tag: BU411
BU411 -318 3.7 AATTTTAATTAAATTCTAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -110
Score: 3.6
Sequence: ATTTATGAAATTAATTATAAAA
Locus tag: BU488
BU488 -110 3.6 ATTTATGAAATTAATTATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybeD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0631 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0636 -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02527 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00663 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1166 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1174 -146 4.2 TATTGTGATTAATCTTATATTG
Position: 15
Score: 4.1
Sequence: TTTTTTGATACTATTAATAATA
Locus tag: BU561
BU561 15 4.1 TTTTTTGATACTATTAATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysQ
Ortholog function: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase
Escherichia coli str. K-12 substr. MG1655 b4214 -126 3.6 AACAGTGAAGAATGCCACAATT
Salmonella typhimurium LT2 STM4404 -144 3.9 TTTTTTGCGAGTGTTCACAGAA
Citrobacter koseri ATCC BAA-895 CKO_03615 -178 4.1 TTTTTAGATCTGAAACACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04608 -178 4.1 TTTTATGAGCGATAGCACAGAA
-126 3.7 AAATGTGAATCTTGCCAGAAAA
-57 3.9 TGATGCGATATAAATAAAACAA
Enterobacter sp. 638 Ent638_0393 -167 3.9 TTTTTCGATCCAAGCCACAAAA
Erwinia amylovora ATCC 49946 EAM_0455 -158 4.2 AAATGTGACACAGCACGAATAA
Serratia proteamaculans 568 Spro_0454 -180 3.7 AACTGTGAAGTGTGGCAGAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3601 -258 3.7 TAAAGTGATTATCGTCTCTAAA
Position: -275
Score: 3.8
Sequence: AAACTTGATTTTAATAAGATAA
Position: -70
Score: 4
Sequence: ATTTTTTAGATATATAACAATT
Locus tag: BU573
BU573 -275 3.8 AAACTTGATTTTAATAAGATAA
-70 4 ATTTTTTAGATATATAACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA