Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR regulog to Yersinia pestis Angola

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis Angola
Orthologous TF(s) YpAngola_A4104
Regulated genes 2
Built upon 61 sites [see more]
Predicted regulatory interactions in Yersinia pestis Angola
Locus tag Position Score Sequence
Position: -27
Score: 4.4
Sequence: ATATATTATCGCTATCAGGA
Locus tag: YpAngola_A1800
YpAngola_A1800 -27 4.4 ATATATTATCGCTATCAGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnO
Ortholog function: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Escherichia coli str. K-12 substr. MG1655 b4266 -146 3.8 TAtTtcTACtGaTAAgAaTT
-116 3.8 TcAcGTTAtgcGTAACATag
Salmonella typhimurium LT2 STM4483 -116 4.3 TcAcGTTAtgcGTAACATTg
Citrobacter koseri ATCC BAA-895 CKO_02793 -39 4.8 TACAGTTACGCGTAACAGCT
Serratia proteamaculans 568 Spro_3288 -120 4.2 TcAcGTTAaaGGTAACAgcT
Position: -91
Score: 5.6
Sequence: ATTTGTTACCGGTATCATGA
Position: -77
Score: 5.5
Sequence: TCATGATACCGGTAACATGG
Locus tag: YpAngola_A4107
YpAngola_A4107 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Yersinia pestis KIM y3876 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
-77 5.1 TCATGATACCGGTAACGTGA
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