Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FadR regulog to Escherichia coli O26:H11 str. 11368

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli O26:H11 str. 11368
Orthologous TF(s) ECO26_1700
Regulated genes 10
Built upon 130 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Escherichia coli O26:H11 str. 11368
Locus tag Position Score Sequence
Position: -38
Score: 4.5
Sequence: AAGTGGTCAGACCTCCT
Locus tag: ECO26_0237
ECO26_0237 -38 4.5 AAGTGGTCAGACCTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadE
Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Escherichia coli str. K-12 substr. MG1655 b0221 -38 4.5 AAGTGGTCAGACCTCCT
Salmonella typhimurium LT2 STM0309 -39 4.5 AAGTGGTCAGACCTCCT
Citrobacter koseri ATCC BAA-895 CKO_02965 -39 4.5 AAGTGGTCAGACCTCCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00235 -40 4.5 AAGTGGTCAGACCTCCT
Enterobacter sp. 638 Ent638_0758 -39 4.5 AAGTGGTCAGACCTCCT
Erwinia amylovora ATCC 49946 EAM_0890 -38 5.1 AACAGGTCCGACCACTT
Yersinia pestis KIM y0946 -36 4.7 AACAGGTCAGACCTCCT
Serratia proteamaculans 568 Spro_0949 -35 5.1 AACAGGTCAGACCTCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3474 -129 5.1 AACAGGTCAGACCTCTT
Proteus mirabilis HI4320 PMI0348 -44 4.6 AACAGGTCTGACCTCTG
Photorhabdus luminescens subsp. laumondii TTO1 plu1192 -57 4.6 AACAGGTCCGACCTCTG
Position: -59
Score: 4.5
Sequence: AAGAGGTCATACCAGTT
Locus tag: ECO26_0478
ECO26_0478 -59 4.5 AAGAGGTCATACCAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadM
Ortholog function: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Escherichia coli str. K-12 substr. MG1655 b0443 -59 4.5 AAGAGGTCATACCAGTT
Salmonella typhimurium LT2 STM0454 -70 3.9 TAGAGGTCATACCAGTT
Citrobacter koseri ATCC BAA-895 CKO_02717 -59 4.4 ATGAGGTCATACCAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00405 -54 4.3 AAGTGGTGTGACCTCTT
Enterobacter sp. 638 Ent638_0910 -58 4.1 AAGAGGTCATACCAGTC
Yersinia pestis KIM y1033 -49 3.8 TTGAGGTCCTACCAGTT
Serratia proteamaculans 568 Spro_1101 -97 4.3 TACAGGTCTTACCAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1154 -44 4.4 ATCAGGTCGTACCAGTT
Position: -89
Score: 4.4
Sequence: AGCTGGTATGATGAGTT
Locus tag: ECO26_2574
ECO26_2574 -89 4.4 AGCTGGTATGATGAGTT
Supported by regulated orthologs from reference regulons