Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AllR regulog to Escherichia coli O26:H11 str. 11368

Reference regulog properties
Source regulog: AllR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Allantoin utilization
Effector: Allantoin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli O26:H11 str. 11368
Orthologous TF(s) ECO26_0539
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Escherichia coli O26:H11 str. 11368
Locus tag Position Score Sequence
Position: -124
Score: 6.6
Sequence: TTGGAATATTTTTCCAA
Locus tag: ECO26_0537
ECO26_0537 -124 6.6 TTGGAATATTTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allS
Ortholog function: DNA-binding transcriptional activator of the allD operon
Escherichia coli str. K-12 substr. MG1655 b0504 -124 6.6 TTGGAATATTTTTCCAA
Salmonella typhimurium LT2 STM0514 -122 6.6 TTGGAATATTTTTCCAA
Position: -122
Score: 6.6
Sequence: TTGGAAAAATATTCCAA
Locus tag: ECO26_0538
ECO26_0538 -122 6.6 TTGGAAAAATATTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: allA
Ortholog function: ureidoglycolate hydrolase
Escherichia coli str. K-12 substr. MG1655 b0505 -122 6.6 TTGGAAAAATATTCCAA
Salmonella typhimurium LT2 STM0515 -121 6.6 TTGGAAAAATATTCCAA
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