Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GcvA regulog to Salmonella enterica subsp. enterica serovar Typhi str. E98-2068

Reference regulog properties
Source regulog: GcvA - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: dual
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E98-2068
Orthologous TF(s) SentesTyp_010100036246
Regulated genes 1
Built upon 34 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E98-2068
Locus tag Position Score Sequence
Position: -341
Score: 5.1
Sequence: ATTATATTTTCTAAT
Locus tag: SentesTyp_010100021935
SentesTyp_010100021935 -341 5.1 ATTATATTTTCTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvT
Ortholog function: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Citrobacter koseri ATCC BAA-895 CKO_04269 -371 5.3 TTGAAATAATCTAAT
-339 4.5 ATTAGTTTTTTTAAT
Edwardsiella tarda EIB202 ETAE_2941 -349 4.8 GTGAAATATTCTAAT
-316 4.2 ATTAGTTTTTCTCAT
Enterobacter sp. 638 Ent638_3324 -369 5.2 TTGAAATATTCTAAT
-337 5.1 ATTAGATTATCTAAT
Erwinia amylovora ATCC 49946 EAM_2791 -340 5.2 TTGAAATATTCTAAT
-308 4.5 ATTAGTTTAAATAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0743 -338 5.2 TTGAAAAAATCTAAT
-306 5.1 ATTATATTATCTAAT
Escherichia coli str. K-12 substr. MG1655 b2905 -370 5.3 TTGAAATAAACTAAT
-338 5.1 ATTATATTTTCTAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03341 -372 5.2 TTGAAATATTCTAAT
-340 4.8 ATTAGATTTATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3598 -372 5 CTGAAAAAATCTAAT
-340 4 ATAACTTTTTCTCAT
Proteus mirabilis HI4320 PMI2021 -427 5 CTGAAAAAATCTAAT
Salmonella typhimurium LT2 STM3055 -373 5.3 TTGAAATAATCTAAT
-341 5.1 ATTATATTTTCTAAT
Serratia proteamaculans 568 Spro_3916 -396 4.9 ATTAGTTTTTCTAAT
Yersinia pestis KIM y3294 -363 5.3 TTGAAATAATCTAAT
-304 4.4 TTTAAAAAGTTTAAT