Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Salmonella enterica subsp. enterica serovar Typhi str. E98-2068

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E98-2068
Orthologous TF(s) SentesTyp_010100007949
Regulated genes 8
Built upon 73 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E98-2068
Locus tag Position Score Sequence
Position: -48
Score: 5.5
Sequence: GGTGTATATTAAATACATC
Locus tag: SentesTyp_010100006574
SentesTyp_010100006574 -48 5.5 GGTGTATATTAAATACATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehB2
Ortholog function: tellurite resistance-like protein TehB2
Salmonella typhimurium LT2 STM1808 -48 5.5 GGTGTATATTAAATACATC
Citrobacter koseri ATCC BAA-895 CKO_01186 -48 5.9 GATGTATATTAAATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02314 -43 5.6 GGTGCATATTAAATACATC
Position: -248
Score: 3.8
Sequence: TAGTCATTTTCTATACATC
Locus tag: SentesTyp_010100007144
SentesTyp_010100007144 -248 3.8 TAGTCATTTTCTATACATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1369 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1760 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -191 3.9 AATAAATTAAAGATATACC
Position: -218
Score: 4.3
Sequence: GTTGTATACAAAATATCTT
Locus tag: SentesTyp_010100007504
SentesTyp_010100007504 -218 4.3 GTTGTATACAAAATATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhO
Ortholog function: putative exported protein
Escherichia coli str. K-12 substr. MG1655 b1655 -217 4.8 GTTGCATTTCAAATATTCG
Salmonella typhimurium LT2 STM1432 -185 4.3 GTTGTATACAAAATATCTT
Enterobacter sp. 638 Ent638_1792 -223 3.9 GTTGCATTCGCAATATAGT
Position: -208
Score: 3.7
Sequence: GATGTAAAAAAATAGCAAT
Position: -135
Score: 3.7
Sequence: AAGATATTTTGTATACAAC
Locus tag: SentesTyp_010100007509
SentesTyp_010100007509 -208 3.7 GATGTAAAAAAATAGCAAT
-135 3.7 AAGATATTTTGTATACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: grxD
Ortholog function: Probable monothiol glutaredoxin ydhD
Escherichia coli str. K-12 substr. MG1655 b1654 -135 4.4 CGAATATTTGAAATGCAAC
Salmonella typhimurium LT2 STM1433 -208 3.7 GATGTAAAAAAATAGCAAT
-135 3.7 AAGATATTTTGTATACAAC
Citrobacter koseri ATCC BAA-895 CKO_01665 -134 4.3 GAGATATTTAGAATGCAAC
Position: -47
Score: 5.6
Sequence: GATGCATTTGATATACATT
Locus tag: SentesTyp_010100016169
SentesTyp_010100016169 -47 5.6 GATGCATTTGATATACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Escherichia coli str. K-12 substr. MG1655 b2552 -47 5.7 GATGCATTTGAGATACATC
Salmonella typhimurium LT2 STM2556 -79 4.8 GATCCATTTACAATGCAAG
-47 5.8 GATGCATTTGATATACATC
Citrobacter koseri ATCC BAA-895 CKO_00235 -47 5.5 GATGTATTTGACATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02877 -47 6.3 GATGCATTTAAAATGCATC
Enterobacter sp. 638 Ent638_3037 -47 6.2 GATGCATATAAAATACATC
Yersinia pestis KIM y1321 -58 6.1 GATGCATTTAAAATACATG
Serratia proteamaculans 568 Spro_3639 -59 6 GATGCATTTAAAATGCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3251 -51 5.9 GATTCATATAAAATACAAC
Edwardsiella tarda EIB202 ETAE_2822 -45 6.2 GTTGCATTTAAAATACAAC
Proteus mirabilis HI4320 PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Photorhabdus luminescens subsp. laumondii TTO1 plu3292 -64 5.4 GTTGCATTTAAATTACATG
Position: -86
Score: 4.4
Sequence: GGTGTAAAATAAATGCATC
Locus tag: SentesTyp_010100017004
SentesTyp_010100017004 -86 4.4 GGTGTAAAATAAATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbA
Ortholog function: hypothetical protein involved in nitrosative stress
Escherichia coli str. K-12 substr. MG1655 b2732 -38 5.1 GATGTAATATAAATACATC
Salmonella typhimurium LT2 STM2860 -40 4.4 GGTGTAAAATAAATACACC
Enterobacter sp. 638 Ent638_3209 -39 4.1 GATGTATTATTTATGCACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2415 -39 5.6 ATTGTATTTAAAATGCATC
Proteus mirabilis HI4320 PMI1959 -215 3.7 ATTGTTTGTTAAATAAAAT
-38 5.8 AATGCATTTTAAATGCAAC
Position: -35
Score: 5.7
Sequence: CATGTATATTAAATATAAC
Locus tag: SentesTyp_010100026077
SentesTyp_010100026077 -35 5.7 CATGTATATTAAATATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Citrobacter koseri ATCC BAA-895 CKO_02206 -1 5.7 CATGTATATTAAATATAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00907 -1 5.7 CATGTATATCAAATATAAC
Enterobacter sp. 638 Ent638_1390 -35 5.6 CATGTATCTAAAATATAAC